Medicago truncatula (barrel medic): 11419484
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Entry
11419484 CDS
T01716
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
11419484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11419484
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
11419484
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
11419484
NCBI-ProteinID:
XP_003625475
UniProt:
G7KZK8
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Position
7:46775123..46779596
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AA seq
467 aa
AA seq
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MNNYCVSYFQSQMDQQRLPRPKKPIIADDEIMELLWQNGQVVTQRPNHRHAKKPPSCQET
TRGGGASPVENYNQYLFMQENEMASWLHYDDSPFDRTFSTDYLNTPPATANNNSSIQTPT
SVVPSRPPIPPPRRMGHVQPETPNFAKHGVMNTAVRESTVVDSCDTPAVMPAAFSETVKS
LADQTEGDTEVAVVSTTFDEPGGSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDF
ESAEAKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEA
IDYLKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTVGMGMGMGMEMGINRPVMPF
PNMLSGSALPAAANLGPRFAMPPFHMPHVPTPGSSRMQAANQVDNNVITSAGTHDSNQSR
TPNFSDSYQQYLGPHQMQFQLMQNQAMNQPNVSRPLEKPETRQSGDK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactactgcgtttcatatttccaatctcaaatggatcaacaacgattgcctcgt
cctaagaaaccaatcattgcagatgatgagatcatggagttgttatggcaaaacggccaa
gttgttacacagaggccaaaccaccgtcatgccaagaaaccaccgtcatgtcaagaaaca
actcgcggcggaggagcttctccagtagaaaactacaatcaatatctcttcatgcaagaa
aacgaaatggcttcatggcttcattacgatgattctcccttcgatcgaaccttctccact
gattacctcaatacgccgccggcgacggctaataacaacagtagcatacaaactccgacg
tcggtggttccttctcgtcctccaattcccccgccacggaggatggggcacgtacagcct
gagacaccgaatttcgcaaaacacggtgtaatgaacactgctgtgagggaatcaacggtt
gtggattcgtgtgatacaccagctgtgatgccggcggcgttttcggagacggtgaaaagc
ttggcggatcaaacggaaggagacaccgaagtagcggtggtttcgacaacttttgatgaa
ccgggaggttcaagtagcagtgaagaacctgaaccggttgggaaggtagcggagcaggac
cgaaagaggaagggaatagaagcggaggaatgggaatatcagagcgaggatgttgatttt
gaatctgcggaagccaaaaaaaatatcagtggatcatctacaaagagatctcgtgctgct
gaggtccataatctctcagagcggaggcgccgtgatcggattaatgaaaagatgaaagct
ctgcaagaacttatacctcgatctaataagtctgacaaagcatctatgctggatgaagca
attgattacttgaagtcgctgcagttacaagtgcagagagtacaacttatgcagatgatg
tccatgggatgtggcatggtacctatgatgtttcctggaatccagcagtatatgccaacg
gttggaatgggaatggggatgggtatggaaatgggaataaacagaccagtaatgccattt
cccaatatgttatccggttctgctttgcctgcagccgcaaatttgggaccaaggttcgcg
atgcctcctttccatatgccgcatgttccaacacctggttcatccagaatgcaagcagca
aatcaggtagataataatgtgatcacctcagctggaacacatgattcaaatcagtcacgt
accccaaacttcagtgattcttatcaacaatatcttggaccccaccagatgcagtttcaa
ttgatgcagaatcaagcaatgaaccaaccaaatgtcagcaggcctcttgagaaaccagaa
acccgccagtcaggagataagtga
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