Medicago truncatula (barrel medic): 11429978
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Entry
11429978 CDS
T01716
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
11429978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11429978
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
11429978
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
11429978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
PTR3_N
Motif
Other DBs
NCBI-GeneID:
11429978
NCBI-ProteinID:
XP_003603490
UniProt:
G7JC88
LinkDB
All DBs
Position
3:53466569..53471787
Genome browser
AA seq
309 aa
AA seq
DB search
MGEVAVMHSEPLQFECNDRKLITEKDVHNLPSNEERMHGEKSSQSPDHKKINDLRERGYM
EYGCQHYRRRCHIRAPCCNEIFDCRHCHNEAKNSIDIDQKHRHDIPRHQVKQVICSLCET
EQEVQQNCINCGVCMGKYFCGTCKLFDDDVSKQQYHCSGCGICRTGGSENFFHCYKCGCC
YSTLLKNGHPCVEGAMHQDCPVCFEYLFESVNDVSVLHCGHTIHKSCLNEMREHFQYACP
LCSKSVCDMSKVWEKIDLELAATPMPEPYLNKTVWILCNDCGENSHVQFHLVAQKCLNCK
SYNTRQTRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagtggcagtaatgcactccgagcctcttcaatttgagtgcaatgacaggaag
cttatcacggagaaagatgtgcataatctaccctcaaatgaagagcgcatgcatggcgaa
aagtctagccaatcaccagaccacaaaaagatcaatgacttgcgagagagaggatatatg
gagtatggatgtcaacattaccggagaaggtgtcatatcagggccccttgttgcaatgag
atatttgattgtcgccattgtcacaatgaggcaaaaaacagcatcgacatcgatcagaag
catagacacgacattccccgccatcaagtcaaacaagtgatatgttcactatgtgagact
gaacaggaggttcagcagaactgtatcaattgcggcgtgtgcatgggcaagtatttttgc
gggacatgtaagctctttgatgatgatgtatctaagcagcagtaccattgcagtggttgt
ggaatttgcagaactggagggtctgaaaatttcttccactgctacaagtgtggttgttgc
tactcaactttgttgaaaaacggtcacccttgcgtggaaggagcaatgcatcaagattgt
cctgtttgttttgagtatttgtttgaatctgtcaacgacgtctccgtgttgcattgcggc
catacaatccataagagctgtctgaatgaaatgagggaacattttcagtatgcatgccct
ttgtgctcaaagtcagtttgtgatatgtcaaaggtttgggaaaaaattgacttggaactg
gctgctacaccgatgcctgaaccatatcttaataaaacggtttggatcctttgcaatgat
tgtggcgaaaattctcacgtccagtttcatcttgttgcacaaaagtgcttgaactgcaaa
tcttataacacaagacaaaccagaggctga
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