Medicago truncatula (barrel medic): 11430037
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Entry
11430037 CDS
T01716
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
KO
K12126
phytochrome-interacting factor 3
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
mtr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
11430037
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
11430037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11430037
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
11430037
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
SCPU
Motif
Other DBs
NCBI-GeneID:
11430037
NCBI-ProteinID:
XP_003626080
UniProt:
G7KUN6
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Position
7:52437316..52439639
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AA seq
373 aa
AA seq
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MFDSSNSEMTKSNGLGSSHMFTYLTPLKKPRVDSNQTATTNSQKQYLMGCEYQKNGKVNF
SNFSIPAVFLKSNQQRVQEKESKAVACTKFQQQKHLTLNAATKSNSGYERSRELLPTVDE
HSEAAASHTNAPRIRGKRKASAINLCNAQKPSSVCSLEASNDLNFGVRKSHEDTDDSPYL
SDNDEETQENIVKEKPVREGNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNK
MDKASMLDDAIDYLKTLKLQLQIMSMGRALCMPLNHFMMLPAHHMNMNMNMNAQHLMMGF
RPHVQFPIPQMGDGVTNNNNDRVQMFGFSNQLPPQMSIPNAPFIPPIIGNSSSTTPPTPT
TFGNQNQPGRTCG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattctagcaactcagagatgacaaaaagcaatggcctaggttcctctcacatg
ttcacatatttaactcctctcaaaaaaccaagagtggattcaaaccaaactgcaacaaca
aactcacagaaacagtacttgatggggtgtgaatatcaaaaaaatggaaaagtgaacttc
tcaaacttttctatacctgcagtgtttctcaaatcaaatcaacaaagagtacaagagaaa
gaatcaaaagcagttgcttgtacaaaatttcaacaacaaaaacacttaactttaaatgct
gctaccaaatcaaactctggatatgaaagaagtagagaattactaccaactgttgatgaa
cattctgaagctgctgctagccataccaatgcacctagaattagaggaaagagaaaagct
agtgctattaacttatgtaatgcacaaaaaccatcttctgtatgttcacttgaagcctca
aatgatttaaactttggtgttagaaaatcacatgaggacactgatgactctccttattta
agtgataatgatgaagaaacacaagaaaatatagtgaaagaaaagccagttcgagaagga
aacagagtcaagagaagctacaggaatgcaaaagttcataatttatctgaaaggaagaga
agagataaaattaatgagaaaatacgtgcattgaaagagctcataccaaattgcaataag
atggacaaagcttcaatgcttgacgatgcaatcgattatcttaagaccctcaagcttcag
ttacagattatgtcaatgggaagagcactttgtatgccacttaatcattttatgatgtta
cccgcacatcatatgaacatgaatatgaatatgaatgcacagcatttgatgatgggtttt
aggccacacgtacagtttcctattccacaaatgggtgatggtgtcacaaacaataacaac
gacagagttcagatgtttggtttctccaaccaattaccaccacaaatgtcaattcccaat
gcacctttcattcctcctatcattggaaactcttcttcaaccacaccaccaacaccaacc
acttttggtaaccagaatcaacctggaaggacatgtggctag
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