Medicago truncatula (barrel medic): 11433315
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Entry
11433315 CDS
T01716
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X2
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11433315
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11433315
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
11433315
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
11433315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
11433315
NCBI-ProteinID:
XP_003588515
UniProt:
G7I3I1
LinkDB
All DBs
Position
1:718761..734543
Genome browser
AA seq
1462 aa
AA seq
DB search
MERGMINHNPKKRKLVLNDDDDDTGIRKMRKFKVLLPNGTSVELKVLNTENAMHFGEFVG
LIRTRYLQVQRKNESMRKKREINWNSGGLFLEDVSDNKIKNVVDFKNFIPNKCHILRLND
GKGDVADTFENMWDLTPDTDLLLELPEDYNFEAAIADLIDNALQAVWSNEKNSRKLIRVN
VTNKKITIFDNGSGMDDSNENSLVKWGKMGASLHRLSKSQAIGGKPPYLMPYFGMYGYGG
PIASMHLGRRTFVSSKTKHVKKVYMLLLQREALLKRSNSEATWKTNGGIREPLQDEIRDS
HGSFTKVDIFEPKVKDVDINKLQCHLKDIYFPYIQNDDLSERGKTITPIEFQVNGVDLTE
IQGGEVATTNLHSCNGPEFVLQLRMSLVQDHGSREFQEANARLRFVYFPFSEGKESIERV
LENLTADGYIIKESFENFSRVSVRRLGRLLPDARWTLLPFMDWRNKRVLTNKTRILKRCS
LRVKCYVETDAGFKPTQSKTDLAYHNPFTIALKNLGSKISYKDNDVSVEISTASKMLNPL
QLEKEYNNWILQMHTRYDEEADAGDDKPVILVNPPNKKALGISDDVVRVHRVLKRKEKTW
SHGQRIKVLKGACPGCHNNNVYATIEYFLLEKFEGDPGGEAQIICRPIDIPEENGCSLDV
SNDENPTLNIGSSLSLPLSVIDAEKLLPVESIEWERRLNKIQQKSPACIDSPGSNRHKHY
KRKQIDVVDSISKSFEKRVTGKPSHCAKKYELLTDDQSPELDVRVGSTFPTLAIACYDIH
GNRAPFQTIPDVTVQLQAAKDLYFKVHGTKIGLSTDKMILKIMDAMVTLTSNDLDKIRPS
YMTNLIIASENIPLSLSFPCRVSPAYPEHVELKPNIREDQLIPGFIVKELVLEMFDAYRN
HVSEGMEVNIVVDGFEMLNHCSAYKVADKGKIDLSGLLKLTAGYGENASISVTFEGRPIF
KQDFSIARRILRIASKVPDFCAAGGQLENVKFEIVNIDGDVDTKIHHDNQDYQFHMLTIK
SDLINAEESIRYLFKQGCCTVPFIRVPEIEGTFCFEAFHSQYTKLCLAVKVRVIKMSNAK
DVAQLLSPDKNIFPLQELSPFNHENNLMISVLNSEGKICQLGSKIKKVEEYLKTCHEEKA
EKEKEMLKLRDNVNVNTKEEVITKIKSMENSATSVLCSLSAHEKQQNHFLEDIIGVVALL
GSVKSPKLSRMLAEYLGEDQMLGVICRSFDTAVSLYKQNGEIDCLHAEAAGLGEAIISKR
FLVMSFEDLRPYKGYLQEHDPQMKLALPNPKLHNGRTPAGFIGYAVNMIDLDSHHLQTRT
ALGHGLRETVLFSLFKKLHVYETRENMVDALDCIEDGAVSLDGGIIRENRALSIGYGNPS
VYFPCTNKLDISPEAMGILTQIEEELLLIEEKIDKATNYHQKCLHKFERKEKKYKKLMDK
IEPMAELLEPKPEIGTLVNLAD
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggggaatgattaatcacaaccctaagaaacgaaaactggtgctaaacgatgat
gatgatgataccggaatccgaaaaatgcgaaagttcaaagtgttgttaccgaatggaact
agtgtggaattgaaagttctgaacacagaaaatgcaatgcattttggtgaattcgttgga
ttaattcgaactaggtatctacaagttcagaggaagaatgaatccatgaggaagaaaagg
gaaatcaattggaatagtggtggtttgtttcttgaagatgttagtgataataagatcaag
aacgttgttgatttcaaaaatttcattcctaacaagtgccacattttacgccttaatgat
gggaaaggcgatgttgctgacacctttgagaatatgtgggacttgacgccagatacagat
ttgctgctggagcttcctgaagattataattttgaagctgctattgctgacttgattgat
aatgctttgcaggctgtgtggtccaatgaaaaaaacagtaggaagctaattagagttaat
gtaactaacaagaagattacaatttttgacaatggctctggaatggatgactctaatgag
aattccctagtaaaatggggaaaaatgggagcgtcacttcaccgattatcaaaatcacag
gctattgggggaaaacccccatacttaatgccttattttggaatgtatggatatggtgga
cctatagcatctatgcatttggggaggcgtacttttgtttcgtccaagacaaaacatgta
aagaaagtctacatgttacttcttcagagagaagctttgttgaaaagatccaactctgaa
gccacatggaagacaaatggtggcataagggaacccttacaggatgaaatcagggattct
catggcagctttacaaaggttgatatttttgagccaaaagtaaaagatgttgatattaac
aaactccagtgccacctcaaggacatatatttcccctacattcagaatgatgacttgtct
gaaagagggaagaccattacaccgattgagttccaggtcaacggtgttgatctgacagag
attcaaggtggggaggttgcaacaactaatttgcattcttgcaatggtcctgagtttgtt
ctgcagcttcgtatgtctcttgtacaagatcatggttcaagggaattccaagaagcaaat
gcacgccttagattcgtatatttccctttctcagagggaaaggagagcattgagagggtt
ttggaaaatttaacggctgacggttacattataaaggagagcttcgaaaactttagtcgg
gtttccgttaggcggcttggtcgtctccttccagatgctcgctggactttacttcctttt
atggactggaggaacaaaagggtattgactaataagacaaggatactgaagagatgttcc
ctaagagttaaatgctatgttgaaactgatgctggttttaagccaacccagtcaaagacg
gatttagcttaccacaatccattcaccattgctttgaagaacttgggtagtaaaatttca
tacaaagacaatgatgtttctgttgaaattagcacagcctcaaaaatgttaaatccttta
caactagaaaaggagtacaacaactggattctacaaatgcacactcgttatgatgaagaa
gctgatgccggtgacgataagccagttatacttgtcaatccgccaaacaagaaagcactt
ggcatttccgatgatgtcgttagagttcatcgggttctgaagagaaaggaaaagacatgg
agtcatggacagagaattaaagtgttaaaaggagcatgcccagggtgtcacaacaacaat
gtttatgcaaccatagagtactttttgcttgaaaaatttgaaggagacccgggtggagaa
gctcaaatcatatgcaggccaatagatatcccagaggagaatgggtgctctcttgacgtc
agtaatgacgaaaaccccaccttgaatattggtagctctttgtctttaccattaagcgtg
atcgacgcagaaaagcttttacctgttgaaagtattgaatgggagcgtcgacttaataag
atacaacagaaatctcctgcttgtattgactcgccgggctcaaaccgtcataaacactat
aaacgaaagcagattgacgtggtggattcaatcagcaaaagttttgagaaaagggtgaca
ggaaaaccttctcattgtgctaagaagtacgaacttctaactgatgaccaaagtcctgag
ctagatgtgagggttggttctacgtttccaaccttagccattgcatgttatgacatccat
ggtaatcgagcaccgtttcaaacgattccggatgtgactgttcaacttcaggcagcgaag
gacttgtacttcaaagtgcatggaacgaagattggtctttcaactgataaaatgatttta
aaaatcatggatgcaatggttacacttacaagtaatgatttggacaagataaggcctagc
tatatgactaatttgattattgcttcagaaaatattccgttgtcactatcttttccgtgc
cgagtttctcctgcttatcccgaacatgttgaactgaagcctaatataagagaagaccaa
ctaattccaggtttcattgtcaaggagttagtgttggagatgtttgacgcatatagaaac
catgtgtctgaaggcatggaggttaatattgttgtggatggatttgaaatgctaaatcat
tgcagtgcatacaaggttgctgataaaggaaaaattgatcttagtggtctactaaagtta
acagcaggttatggtgaaaatgcatccatatcggttacattcgaaggtagaccaatattc
aagcaggatttttcaattgcacgaagaatcttgagaatagcatctaaggtgcctgatttt
tgtgctgctggtggtcagctagaaaacgttaaatttgaaattgtcaatattgatggagat
gttgatacgaagattcatcacgacaatcaagattaccagtttcatatgcttacaattaag
tcagaccttattaatgcagaggaatctatacgatatcttttcaagcagggatgctgtaca
gttccattcatacgtgttccagaaattgaggggactttttgttttgaagcttttcattca
caatataccaagctatgtctggctgtaaaggtgcgagttatcaaaatgtccaatgcgaaa
gatgttgcacaacttctatccccggataagaatatttttcccttgcaggaactatcacca
tttaatcatgaaaataacttaatgatctctgtcctaaatagtgaaggaaagatttgccaa
cttggaagcaaaattaaaaaagtagaagaatatcttaaaacttgtcatgaggaaaaggct
gagaaggagaaagagatgttgaagctgcgagataatgttaatgtcaacaccaaagaggaa
gtgattacaaaaattaaaagcatggaaaactcagcaacttctgtcctatgtagtctgtct
gcacacgaaaagcaacagaatcatttcttggaagatataattggggtcgttgccctcctt
ggttctgttaagagtcctaagcttagcagaatgctggctgaatatcttggtgaagatcaa
atgctgggtgttatttgtagatctttcgatactgcagtttctctttataagcaaaatgga
gaaattgattgtttgcatgctgaagcagctggtcttggagaagctataataagcaagcgt
tttcttgttatgtcttttgaagatttaaggccatacaaagggtacctgcaagaacatgac
cctcagatgaagctggcattgcccaatcccaagttacacaatgggagaaccccagcaggc
tttatcggttatgcagttaatatgattgatcttgattcccatcacctacagacaaggaca
gcattgggccatgggctacgcgagaccgttctatttagccttttcaagaagctccatgtt
tatgaaacaagagagaatatggtggatgctcttgactgtatagaagatggtgctgtatca
ttagatggtggtattataagagaaaatagagctctttctattggttatgggaacccttct
gtatactttccttgtacgaacaagttggacatttctccggaagctatgggaatcttaact
cagattgaagaagagttgctgctgattgaagaaaaaattgataaagcaacaaattatcat
cagaagtgtctacataaatttgagagaaaagagaagaaatataaaaaacttatggataaa
attgagcctatggccgagttattggaacctaaaccagagattgggaccttggtaaactta
gctgactga
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