Medicago truncatula (barrel medic): 11434186
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Entry
11434186 CDS
T01716
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X2
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
11434186
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11434186
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
11434186
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
11434186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
Mce4_CUP1
LOH1CR12
RIG-I_C
Motif
Other DBs
NCBI-GeneID:
11434186
NCBI-ProteinID:
XP_024632005
LinkDB
All DBs
Position
1:681028..701664
Genome browser
AA seq
1487 aa
AA seq
DB search
MEGGMIKPPLKKRQVMMMTTNNAVKDIRVLQRIRRFKVLLPNGTIVELKVRIPNEDEMRF
EEFIHLVRIRYLKIRKNSESMKKKSEINWNCDDLYLEDANDNKIKDVVDFGNFVPKKCHI
LRLKVNGIGEFPEWFENMWDLTPDIDLLMELPEDYNFEAAITDLIDNALQAVWFNGKDNR
KLIGVNVSNKKITIFDSGSGMDDSDENSIVKWGKMGASLHRQSKSQAIGGKPPYLMPCFG
MFGYGGPIASMHLGRYTRVSSKTKHVKNVYELWLHREALLNNKSNSEGTWKTTGGIRAPQ
NGEVKSSKGSFTKVDIYKPKVKDVDIKKLQCHLKDIYFPYIQNDDLSDKGRTITPIEFQI
NCVNLAEIQGGEVATTNLHSCNGPEFVLQIQMSYNQDHGSRESKEANAHLRFVYFPFTKG
KESIERVLETLKDDGHIIKENFQNFSRVSVRRLGRLLPDARWAFLPFMDLRNKRVTSNTA
SILKRCSLRVKCYVETDAGFKPTQSKTDLAHQNPFTIALKNLGCKISDKETDVSVKISTA
TKILTPSQIEQEYHEWILEMHRKYDDEADAGEDKPVIVVNPANKEALGISEDVIRVHRVL
KRKEKSWCHGQKIKVLRGACSGFHYSDVYATIEYFLLEGFEGDLGGEARIICRPIDIPED
NGCSLDVSNEENPTLNIGSSFSLPISVIDTEKLVAVDNIKWKDQLKKIQQKLPASIDSPG
TNQYKRKQVDVVDSISADKRMTVKRIHCALKYKLLTNDQCQELDVRVGSTFPSLAIACYD
IHDNRAPFKQIPDDVTVELQAAKDLYFKVHGAKTRLSFDKMTLKIMDAMITSSELDKIRP
SYRTTLIIASENVPFSVSFPCRVSPGYLEYAKLKPNIREDQLLPGFIFKELAFEMFDTYR
NHVSEGVEVNIFLEGFERLNNCSTVYKVDDKGKIDLGGQLKLTAGFGENASISVMFEGEP
KFRQEFSLARRILRIASEVPDFCATGGQLENIEFEIVNADGDVDMKIHNDDQECQFHMLT
IKSGLSNADESIRYTFKHGRCTVPSIRVPEIEGSFCFEASYSQYTELCLIRKVQVIKMSN
VKDVAQHLSPDKNTFPLKELSTLTHDNNLMISVLNSDGKKFDDICQLGQKINEYEDYLKK
FNDQEDETQKELLMLQDNVQHYQLGNADLLFATTKEEMTTKIKNMENSAASVLCSLSARE
KQQNHFLEDIIGVVALLGSVQSPELSRMLAEYLGEDQMLGVICRSLDTAISLEKYKQNGE
IDYVHALNAAEAASLGKAISRRFHVMGFEDIRPYRGNLQNDSQRKLALPDPKLSNRTPEG
FMGYAVNMIELNTHHLQARTASGHGLRETVLFSLFKKLHVYKTSESMMAAIECIENGAVS
LDGGIIRENGTLSLGFGNPYIYFPCGNKMDIPPEATQMLNQIEKKKALLLKIEKGRKTVS
KHLKKSREKFKKKELRYKKHIDTTMKSFAEALKQNPEIGTPMLDLGD
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggaatgattaaaccccctcttaaaaaacgccaagtgatgatgatgacaacc
aacaacgctgttaaagatattcgagttcttcaaaggataagaaggttcaaagtgttgtta
ccaaatggaacaattgtggaactgaaagttcggattcccaatgaagatgaaatgcggttt
gaggaatttattcatttagttcgaattaggtatttgaaaattcggaaaaactccgaatcc
atgaagaagaaaagtgaaatcaattggaactgtgatgatttgtatcttgaagatgccaat
gataataagatcaaggatgttgttgatttcggaaacttcgttcctaagaagtgccatatt
ttacgccttaaagttaatgggattggcgaatttcccgaatggtttgagaatatgtgggac
ttgacaccagatatagatctgctaatggagcttcctgaagattataattttgaagcggct
attactgacttgattgataatgctttgcaagctgtgtggttcaacgggaaagataacagg
aagctaatcggagtaaatgtgagtaacaagaagattacaatttttgacagtgggtctgga
atggatgactcggatgagaattccatagtaaaatggggaaagatgggtgcttcccttcac
cgacaatcaaaatcacaggctattggaggaaaaccgccatacttaatgccttgttttgga
atgtttggatatgggggacctatagcatctatgcatctggggaggtatacccgtgtttct
tccaagacaaagcatgtaaagaatgtctacgagttatggcttcacagagaagctttgtta
aataataaatctaactctgaaggcacatggaagacaactggtggcataagggcaccccaa
aatggtgaagtcaaaagttctaaaggaagctttacaaaggttgatatttataaaccaaaa
gtgaaagatgttgatattaagaaactccagtgccacctcaaggacatatacttcccctac
attcagaatgatgacttgtctgacaaagggaggactatcacaccaattgaatttcagatc
aactgtgttaatctagcagagattcaaggtggggaggttgccactaccaatttgcattct
tgcaatggtcctgaatttgttctgcagattcagatgtcttataatcaagaccatggttca
agggaatccaaagaagcaaatgcacaccttagatttgtatatttccctttcacaaaggga
aaggagagtattgagagagttttggaaactttgaaggatgatggtcatattataaaagaa
aacttccaaaactttagtcgggtctctgttaggcggcttggtcgtctccttccagatgct
cgctgggctttccttccttttatggacttacggaacaaaagagtaactagtaatacggca
agcatattgaagagatgttcgttgagggtaaaatgctatgttgaaaccgatgccggtttt
aagcctacacagtcaaagacggatttagctcaccagaatccttttaccattgctttgaag
aacttgggctgtaaaatttcagataaagagaccgatgtttcggtcaaaattagcacggct
acaaaaatattaactccttcacaaatagaacaagaatatcatgaatggatattagaaatg
cacagaaaatatgatgacgaagctgatgccggtgaggataagccagttatagttgtcaat
ccagcgaacaaggaagcacttggcatttctgaagatgtcattagagttcatcgggttctg
aagagaaaggagaagtcttggtgtcatggacaaaaaattaaagtgttaaggggagcatgt
tcagggtttcactacagcgatgtttatgcaaccatagagtactttttgcttgaaggtttt
gaaggagacctgggtggagaagctcggatcatatgcaggccaatagatatcccagaggat
aatgggtgctctcttgatgtcagtaatgaagaaaaccccaccttgaatatcggtagctct
ttttctttacctataagcgtgatcgacaccgaaaagcttgtagctgttgataatattaaa
tggaaggatcaacttaaaaagatacaacagaaattgcctgcttccattgactcgccaggc
acaaaccagtataaacgaaagcaggttgatgtggtggactcaatcagcgccgacaaaaga
atgacagtgaaacgtattcattgtgctttgaagtacaaacttctaactaatgaccaatgt
caagagcttgatgtgagggttggttctacctttccatccttagccattgcatgttatgac
atccatgacaatcgagcaccttttaaacaaattccagatgatgtgactgttgaacttcag
gcagcaaaagacctgtacttcaaagtgcatggagcaaagactcgtctctcatttgataaa
atgactttaaaaattatggatgcaatgattacaagtagtgaactggacaagataaggcct
agctatagaactactttaattattgcttcagaaaatgttccattttcagtatcttttccg
tgtcgagtttctcctggttatctcgaatatgctaaactgaagcctaatataagagaagac
caactacttccgggtttcattttcaaggagttagcatttgagatgtttgatacatataga
aaccatgtgtctgaaggcgtggaggttaatatttttttggaaggatttgaaaggttaaat
aattgcagtactgtatacaaggtggatgataaaggaaaaattgatcttggtggtcaacta
aagttaacagcaggttttggagaaaatgcatccatatctgttatgttcgaaggtgaacca
aaattcaggcaggagttttcacttgcacgaagaatcttgcgaatcgcatctgaggtgcct
gatttttgtgccactggtggtcagctggaaaacattgaatttgaaattgtcaatgctgat
ggagatgtagatatgaagattcataatgacgatcaagaatgccagtttcatatgcttaca
attaaatcgggcctttctaatgcagatgaatctatacggtacacttttaagcatggacgc
tgtacagttccatctattcgtgttccagaaattgaggggagtttttgctttgaagcttca
tattcgcagtatacagagctatgtctgattcgaaaggttcaagtaattaaaatgtccaat
gtgaaagatgttgcacaacatctatccccggataagaatacttttcccctgaaggaacta
tcaactcttactcatgacaataatttaatgatctctgtcctaaatagcgatggcaagaaa
tttgacgacatttgccaacttggtcagaaaattaatgaatatgaagattatcttaaaaaa
tttaatgaccaagaggatgagactcagaaagagctgttgatgttgcaagataatgttcaa
cattatcaattaggcaatgccgacttgttgtttgccaccaccaaagaagaaatgactaca
aaaattaaaaacatggaaaactcagcagcttctgtcctatgtagtctctctgcacgtgaa
aagcaacagaatcacttcttggaagatataattggggtcgttgccctccttggttctgtt
cagagtcctgagcttagcagaatgttagcggaatatcttggtgaagatcaaatgctaggt
gttatttgtagatctttggatactgcaatttctcttgaaaagtataaacaaaatggagaa
atcgattatgtgcatgctttgaatgctgctgaagcagctagtcttggaaaagctataagc
agacgttttcatgttatgggttttgaagatataaggccatacagggggaacttgcaaaat
gactctcagagaaagcttgcattgcccgatccaaagttatcaaatagaacgccagaaggc
tttatgggttatgcggttaatatgattgagctgaacacccatcacctacaggcaaggaca
gcatcgggccatgggctccgcgagaccgttctatttagccttttcaagaagctccatgtt
tacaaaacaagcgagagtatgatggctgctattgaatgcatagagaatggtgctgtctca
ttagatggtggcattataagagaaaatggaactctttctcttggctttgggaatccttac
atatattttccttgtgggaacaagatggatattcctccagaagctacgcaaatgttgaat
cagattgaaaaaaagaaagcattactactgaagattgaaaaaggtagaaaaacagtatct
aaacatctgaagaagtctcgagaaaagttcaagaaaaaagagttgagatataaaaaacat
atagatacaacaatgaagtcttttgccgaggcattgaaacaaaatccagagattgggaca
cctatgctagacttaggagattga
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