Medicago truncatula (barrel medic): 11443944
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Entry
11443944 CDS
T01716
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11443944
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
11443944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
ResIII
zf-RING_2
zf-Nse
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
11443944
NCBI-ProteinID:
XP_003605955
UniProt:
G7JEP7
LinkDB
All DBs
Position
4:25768983..25777694
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AA seq
935 aa
AA seq
DB search
MELRSRRQRASDEIDSVTDKGKQPMEDIDEKFDFNTDEDDHVASVKCDSDYEAEEIGGQL
PFDLNRDPTIIISDSDGEDNTSDSSDFSGPSSKRRKTRSRKRGSKSKIESADLSGVESAL
EFDLSGVERALEFDQSCVERALEFDLSGVERALLEFDDELFPMVSAEEAPFDLPLPKLPR
KKKAKKTKKGDPKPVLLWHAWKQEHEKWIDQNLLEDVTLDQSEVMNETAEASSDLIVPLL
RYQREWLAWALKQEESVTRGGILADEMGMGKTIQAIALVLSKRELQQMCCEPFEHSDSPG
SSKVLPVIKGTLVICPVVAVTQWVSEIARFTLKGSTKVLVYHGPKRWKSADKFSEYDFVI
TTYSTVESEYRKHVMPPKEKCQYCGRLFHPPSLVFHQKYYCGPDAIRTTKQAKQTKKKKR
GQSSKLDGELEQGSIKKKEEDLEGNDKSFLHAVKWQRIILDEAHFIKSRHSNTAKAVLAL
ESFYKWALSGTPLQNRVGELYSLVRFLQIVPYSYNLCKDCDCRTLDHSSSKVCSNCSHSS
VRHFCWWNKNIATPIQSSGYGDDGKRAMILLKNKLLKSIVLRRTKIGRAADLALPPRIVS
LRRDSLDIKEQDYYESLYNESQAQFNTYVEENTLTNNYAHIFDLLTRLRQAVDHPYLVVY
SPTAAARQGGNLASNGDVEQECGICHDTVEDPVVTSCEHTFCKGCLIDFSASLGQISCPS
CSKLLTVDLTSNKDAVVDKTTTIKGFRSSSILNRIQIENFQTSTKIEALREEIRFMVERD
GSAKAIVFSQFTSFLDLINYSLQKSGVSCVQLVGSMTLTARDNAIKKFTDDPDCKIFLMS
LKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERIL
KLQEKKELVFEGTVGGSSEALGKLTVADLKFLFVT
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgttctcgtcgacaacgcgcttccgatgaaatcgattccgtgactgataag
gggaagcagccgatggaggatattgatgaaaagtttgactttaatacagatgaagatgat
catgtcgcgtctgtgaaatgcgattctgattatgaagctgaagagattggtggacagctc
ccctttgacttgaatcgagatccgactataatcattagtgattctgatggagaagataat
acttctgattcatctgactttagcgggccttcatctaaacggagaaagacacggtccaga
aagagaggtagtaaatccaagatagaatctgcagacctgagtggtgtagagagtgcgctg
gagttcgacctgagtggtgtagagagagcgctggagttcgatcaaagttgtgtagagaga
gcgctggagttcgacctgagtggtgtagagagagcgctgctggagtttgatgatgagtta
tttccaatggtttctgctgaagaggctccatttgatttacctttacctaagctgccaagg
aagaaaaaagcaaagaagacaaaaaagggagatcctaaaccagtgttgttatggcatgct
tggaaacaggaacatgagaagtggatcgatcagaatttgctggaagatgttaccctcgat
cagagtgaagtgatgaatgagacggccgaggcatcgtcagatctgattgttccgttgctg
aggtaccaaagggaatggttagcatgggctttgaagcaggaggaatctgtaaccagagga
ggaatccttgctgatgaaatgggtatggggaaaactattcaagcaattgcccttgtcctt
tctaaacgggaattgcaacaaatgtgctgtgaaccatttgaacactcagattcacccggg
tcatctaaagtccttcctgtgatcaaaggaactcttgtcatctgtcccgtggttgccgtc
actcaatgggttagtgagattgctcgatttactttgaaaggaagcacgaaggttctggtt
tatcatgggccaaagagatggaagagtgctgacaagttctcggaatatgattttgtaata
acaacatattctactgtggaatcggagtacagaaagcatgtgatgcctcctaaggaaaag
tgccaatattgtggaagattatttcacccgcctagtttagtttttcaccagaagtactat
tgtgggcctgatgctattagaacaacaaaacaagcaaagcaaaccaagaaaaagaaaaga
ggtcagagttcaaagttggatggagagttggaacagggctctatcaaaaagaaggaagag
gatctagaaggcaatgacaagtcatttctccatgctgtgaagtggcaaaggatcatattg
gatgaggcacattttataaaatctaggcattctaacactgcaaaagcagttcttgcctta
gagtctttctacaaatgggcattaagtggtacaccccttcagaatcgtgttggagagcta
tactctttggtacgatttctacagatagttccctattcctataacctgtgcaaggactgt
gattgcaggacacttgatcatagctcctctaaagtatgttcaaactgctcccacagttct
gttaggcatttttgttggtggaacaagaatattgccacaccaattcaatcatccggctat
ggtgatgatgggaaaagagctatgattttgctcaaaaacaaacttttaaagagcatagtc
ttaaggcgaactaaaataggcagggctgctgatcttgcacttccgcctaggatcgtttca
ttgaggagggatagcctggatataaaagagcaagactattatgaatcactatacaatgaa
agtcaggcacaatttaatacgtatgtcgaggaaaatactctgacaaataattatgctcat
atttttgacctcctcacacgactacgtcaggctgtggatcatccatatcttgtagtgtat
tctccaactgcagcagcacggcaaggtgggaacttggctagtaatggtgatgttgaacaa
gaatgtggcatttgtcatgatactgttgaagatccagttgttacttcttgtgagcatact
ttttgcaagggatgcttgatagatttctctgcttccttaggacaaatatcatgcccctca
tgctctaaattactcactgttgatttgacttccaacaaggatgcagtggttgataaaaca
acaacaattaagggtttcagatcttcaagcattttaaacaggattcagattgagaatttt
cagacaagtactaaaatagaggcattgagagaagaaattagatttatggttgaaagggat
ggttctgcaaaggcgattgtttttagccagttcacatcattcttggatctcatcaactac
tccctgcagaagtcaggtgtatcttgcgttcaattggttggaagtatgacattgactgct
cgggataatgccattaagaaatttactgatgatccagactgcaaaatttttctcatgagc
ttgaaagccggaggcgttgctctgaatttgactgtagcatctcatgttttcctcatggat
ccttggtggaaccctgcagtggagcgtcaggctcaagacagaattcaccggatagggcag
tacaaaccaatcagaattgtgagatttgtcattgaaaacacaatcgaggagaggattttg
aaacttcaagagaagaaggaactggtatttgaagggactgtaggcggttcttcagaagcc
ctagggaagttgacggtggccgacttgaaatttctctttgttacttaa
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