Medicago truncatula (barrel medic): 25481902
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Entry
25481902 CDS
T01716
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34 isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
25481902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25481902
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25481902
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
25481902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
25481902
NCBI-ProteinID:
XP_024630996
LinkDB
All DBs
Position
1:complement(1827640..1836087)
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AA seq
333 aa
AA seq
DB search
MGEVAVLHSEPLQFECNDKKHMTEEGVYPPKSNPESLPGEESSTYDLQEKGYMEHGCQHY
RRRCRIRAPCCNEIFDCRHCHNEAKNDINVDYKHRHDMPRHQVKQVICSLCGAEQEVDVN
IGLRRVESLLSAICNEERKSLCIDYIHAQQNCVNCGVCMGKYFCDTCKLYDDDISKQQYH
CNGCGICRTGGQENFFHCNKCGCCYSTLLRDSHPCVEGAMHHDCPVCFEYLFESRNDVIV
MPCGHTIHKSCLNEMREHFQFTCPLCSKSVCDMSKVWEKLDMEISATPMPEPYQNKMVWI
LCNDCGKTSNVRFHFVAQKCLNCNSYNTRQTRG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggtggcagtgttgcattctgagcctctgcaatttgaatgcaatgacaagaaa
catatgaccgaagaaggcgtttatcctccaaaatcaaatccggaatccttgcctggagaa
gaatcaagtacatatgatttgcaggagaagggatatatggaacatggatgccaacactac
cggagaagatgccgaatcagggccccctgttgcaatgagatttttgattgccgccattgt
cacaatgaggcaaaaaatgatatcaacgtagattataagcatagacacgacatgcctcga
caccaagtcaaacaggtgatatgttcactttgtggtgctgaacaagaggtcgatgtaaat
atcggtttgagaagagttgaatctttattatctgcaatctgtaatgaagaaagaaaatct
ctctgcatagattatatacatgcacagcaaaattgcgttaattgtggtgtttgcatgggc
aagtacttttgtgatacatgcaagctctacgacgatgatatatctaagcagcagtaccat
tgtaatggctgtggaatttgcagaactggcggacaagagaatttcttccattgtaataag
tgtggttgttgctactcaactctgctgagagacagtcacccctgtgtggaaggagcaatg
catcatgattgccctgtttgttttgagtatttgtttgaatcaagaaatgatgtcattgtt
atgccgtgcggacatacaatccataaaagctgtctgaatgaaatgagagaacatttccag
ttcacatgccctctctgttcaaagtcggtctgtgatatgtcaaaggtttgggagaaattg
gacatggagatttccgctacaccaatgcctgagccatatcaaaacaaaatggtttggatc
ctgtgcaatgattgtggaaaaacctctaatgtccggttccattttgtagcgcaaaaatgc
ctcaactgcaattcctacaacacacgacaaacacgaggctga
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