Medicago truncatula (barrel medic): 25484155
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Entry
25484155 CDS
T01716
Name
(RefSeq) transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
25484155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
25484155
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
25484155
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Penicillinase_R
Motif
Other DBs
NCBI-GeneID:
25484155
NCBI-ProteinID:
XP_013468377
UniProt:
A0A072VK93
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Position
1:complement(33650944..33659499)
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AA seq
534 aa
AA seq
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MNYHVPDFDIQMDDEDEYPIHHSKKPFTQQDDEIMELLWQNGQVVMQSQNHRQFRKPLAP
ATTTTASRVIPEHREIRSTDADNYMNQHLFMQEDEMASWLFDSMNEVEDPPFNRHDFSSE
TIFHSSAGSAGQKHGGGVIQAQATVRESEFVRQSRPAVVAASRPPIHPARKPEMVVNRTH
NFTHFTNTNQSNTRSEPGASSSSMIAAGRESTVVDSCDTPIMTAKTYAASRLSETVRSAT
AETGCVSVSTTGKAATTTLDMTVTSSPGCSSGSAEPVHREPELDRKRKGREPEESEFQSE
DVDFECREEKKQHRGSTSAKRSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKSDKAS
MLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQFMPAMGMGMGMGLGMEMGMGMNRPV
MPFPNMLPNSPLQTAATVAGPFGPRFAMPPFHVPHVPAAAPDSSRMQAENQSDNHLNSLG
ALPPDQSRIPNPNFADPYQQYLGPHQVQQLMQAMNQQNVNRPGTSGSQENPEKH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccatgttccagatttcgatattcaaatggatgatgaagatgaataccctata
catcattcaaagaaacctttcacgcaacaagacgatgagatcatggaactattatggcaa
aatggacaagttgtgatgcaaagccaaaaccaccgccaatttagaaaaccgctggcaccg
gcaaccacaaccaccgccagtcgcgtgattcctgaacatagagagattcgatcaaccgat
gcagataactacatgaatcaacacttgttcatgcaagaagatgaaatggcatcgtggctt
tttgattcaatgaatgaagttgaagatcctcctttcaaccgtcacgattttagttcagaa
acaatttttcattcatcagccggaagcgccggtcagaaacacggcggcggtgttatacaa
gcacaagccacggttcgtgagtcggagtttgttcggcaatcgagaccggcggtggtggca
gcttctcggcctcctattcatccggcgaggaaaccggagatggtggtgaatagaacacat
aatttcacgcatttcactaatacgaaccaaagcaatacgaggagtgaaccaggtgcatct
tcgagttcgatgattgcggcgggaagagaatcaacggtggtagattcatgtgatacgccg
atcatgacagcgaagacgtacgcagcttcgagattatcggaaactgtcaggagtgcgacg
gcggagaccggatgtgtgagtgtgagtaccactggtaaagcggcgacgacgacgttggat
atgacagttacgtcgtcacctggttgctctagcgggagtgctgaaccggttcatagagaa
ccggagttggaccgtaaaaggaagggacgtgaaccggaagaatctgagtttcagagcgag
gatgtcgattttgaatgtcgggaagaaaaaaaacaacaccgtggatctacatccgcaaag
agatcccgtgctgcagaggttcataatctctcagagaggaagcgtcgagatagaattaac
gaaaagatgaaagctttgcaagaacttataccgcggtgcaacaagtctgacaaagcttca
atgttggatgaagcaatcgaatacttgaagtcattgcagttacaagtgcagatgatgtcc
atgggatgtggcatggtacctatgatgtttcctggaattcagcaatttatgccggcgatg
ggaatggggatgggaatgggtttagggatggaaatgggaatgggaatgaacagaccagtg
atgccatttcctaatatgttgcctaattctcctttgcaaacagcagcaactgtagctggt
ccttttggaccaaggttcgctatgcctcctttccatgtgccccatgttcctgcagctgca
cctgattcatccagaatgcaagcagaaaatcaatcagataaccaccttaactcccttggt
gctctgcctccagatcaatcacgcattccaaacccaaacttcgcagatccttaccagcaa
tacctcggtccccaccaggtgcaacaattaatgcaggcaatgaaccagcaaaatgtcaac
agaccaggtaccagtgggagccaagaaaatccagaaaagcattag
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