KEGG   Medicago truncatula (barrel medic): 25492904
Entry
25492904          CDS       T01716                                 
Name
(RefSeq) LOW QUALITY PROTEIN: switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25492904
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    25492904
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3
Other DBs
NCBI-GeneID: 25492904
NCBI-ProteinID: XP_013456665
UniProt: A0A072UMT6
LinkDB
Position
4:38274756..38280847
AA seq 872 aa
MSLQTLKELTLRHCSTQQSSSQSLLRDFDSHLPINRKPPXSSLAHHLRLLDDPDDPPFQP
HDFLSQQQELKLDDEEEEEEEPEIKCVPVKFTSVKSSQIQFDHTGPFEPLLLSSDGELPL
VQVPASINCRLLEHQRVGVKFLYDLYKNNKGGILGDDMGLGKTIQTIAFLAAIFGKEGDS
ILSETRVEKRDPVLIICPSSIIQNWESEFSKWSNFSVAIYHGANRDLIYDKLEANGVEVL
ITSFDTYRIHGNSSLSDIQWNTVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTVMQN
KILELFNIFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPDRFVQIANKRKQHLVSVLNK
YMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRIYRRMIQLPDIQCLINKDLPCSCGSPL
TQVECCKRTVPDGAIWPYLHKDNLDDGCDSCPYCIVLPCLVKLQQISNHLELIKPNPKDD
PDKQVKDAKFAAAVYGPDIDLVGGSMQNESFLGLSDAEHCGKMRALEKLLLSWFSHGDKV
LLFSYSVRMLDILEKFIIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGG
LGLNLVSANRVVIFDPNWNPSQDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYSRQVY
KQQLSNIAVSGKMEKRYFEGVQDCKAFQGELFGICNLFRDLSDKLFTSEIVESHETNKKD
GLETEQQKKTYISEETNLLVSESETRSCSESVRTTSKPDIEFEDVGIVYAHRNEDIVNSR
PVIQRQLSTSSTSSSDGQSEPSSTLVHERKKSDCVPKKQKILLIDERKRAQFSLLAESMG
MEDLAFSKWLLSATPVEREKVLIDYKRKKLKG
NT seq 2619 nt   +upstreamnt  +downstreamnt
atgtcgctgcaaactctgaaggaattaacactgagacactgctcaacccaacaatcatca
tcacaatcccttctccgcgatttcgattcacacctcccaatcaacagaaaacccccanaa
tcctctcttgcccatcaccttcgtctccttgatgaccctgacgacccaccttttcagccc
cacgatttcctttcccaacaacaagaattaaaactagatgatgaagaagaagaagaggaa
gagccagagataaagtgtgtgcctgtgaaatttacttctgttaaatcctctcagattcaa
ttcgatcatactggaccctttgagcctttgcttttgtcttctgacggtgaacttcctttg
gttcaggttcctgcatctataaactgtagactgcttgagcatcagagagtgggagtgaag
tttctgtatgatttgtacaagaataataagggaggcatccttggagatgacatgggtctt
ggaaagaccattcaaacaatagcatttcttgctgccatatttggtaaagaaggagactcc
attcttagtgagacgcgagttgagaaaagagaccctgtattaataatttgcccatcatcc
attattcaaaactgggagagtgaattctctaagtggtccaacttcagcgttgccatttat
cacggcgcaaaccgggatttgatatatgataaattggaagcaaatggagtggaggtactt
attaccagttttgacacttacaggattcacggaaacagttccttgtcagatatacagtgg
aacactgtgattattgatgaggctcatcggcttaagaatgagaaatcaaaactctataaa
gcatgtttagaaattaaaaccctgcgacgatatggtcttaccgggaccgtaatgcaaaat
aagatcttagaattgttcaatatctttgatttagttgcacctggatcccttggaacgcgt
gaacacttccgtgagttttatgatgaaccccttaaacatggtcagaggtcaactgctcct
gatagatttgtccaaattgctaataagagaaaacaacaccttgtatcagttcttaataaa
tatatgttgagaaggacaaaggaagagaccatagggcatcttatgatggggaaggaagat
aacattgttttttgtgcaatgagtgatttgcaaaaacgcatttataggagaatgatccag
cttcctgacattcagtgccttataaacaaggacctaccttgtagttgtggtagccctctc
actcaagttgaatgttgcaaaaggactgtaccagatggagctatttggccttaccttcac
aaagataacctcgatgatggatgtgactcatgcccctattgtattgtccttccatgcctt
gtcaagctacaacagataagcaatcaccttgagctgattaagccaaaccccaaagatgac
cctgacaaacaagttaaagatgcaaagtttgctgctgctgtctatggcccagacattgac
ttagttggtgggagcatgcagaatgagagtttcctgggtctaagtgatgcagaacattgt
ggcaaaatgcgagcacttgaaaagctattgttgtcatggttttcacatggcgacaaagtt
cttttgtttagctattctgtaaggatgctggacatactggagaaatttatcataagaaaa
ggctactgcttctcaagacttgatgggtccactccaactaatttacgtcagtctctggtt
gatgatttcaactctagtccaagcaaacaagtgttcctgatatcaactcgtgctggtggg
ctcggattgaaccttgtcagtgcgaaccgtgtcgtaatatttgatcccaactggaatccc
tcacaagacttacaggctcaggacaggtcctttcgatatggacagaaacggcatgttgtg
gtattccgtcttctctcagctggttcacttgaagaactagtttattctcgtcaggtgtac
aagcagcagctctcaaacattgctgtctctgggaagatggaaaaacgatattttgaaggt
gtccaggattgcaaagcatttcaaggggagctttttggaatctgcaatttatttcgagat
ttatctgataaactatttaccagtgagatcgttgaatcgcatgagacgaataaaaaagac
gggcttgaaacagaacagcagaaaaaaacatatatttcagaagaaacaaatttgttagta
tcagagtcggaaaccaggtcatgttctgaatctgtgaggactacaagtaaaccagatatt
gaatttgaagacgtcggcattgtctacgctcatcgcaatgaagacattgtcaactcccga
ccagtgattcaaaggcagttatctaccagcagcacctcttcaagcgacggccaaagcgag
ccaagcagcactttagtccatgaaaggaagaaatcagattgtgtacctaaaaaacagaaa
attcttttgatcgatgaaaggaagagagcccaatttagcctgctcgctgagagtatgggc
atggaagaccttgcatttagcaaatggttgctatccgccactccagtagagagagaaaag
gtgcttatagactacaaaaggaaaaagcttaaaggttga

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