Mesitornis unicolor (brown roatelo): 104533166
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Entry
104533166 CDS
T08455
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104533166 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mui03400
]
104533166 (LIG4)
Enzymes [BR:
mui01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104533166 (LIG4)
DNA repair and recombination proteins [BR:
mui03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104533166 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Tox-REase-9
ATG17_like
Motif
Other DBs
NCBI-GeneID:
104533166
NCBI-ProteinID:
XP_010190953
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MASTPASQSSKKTVASQVPFAHLCSTLERIQMCKSRPEKYKYFKDFLDSWRKFHDALHKK
EKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPA
GSRGDAGDFAMIAYFVLKPRSPKQGRLSIEQVNEHLDTIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLS
DVSIMLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLEGSLTPFIHTVFKSSIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNDKKLGHEVLSKRYEILSSVFTPVTGRIQVVHKKSARTRKEVID
ALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVTGLMDELDLLIVGGYWGTGSR
GGMMSHFLCAVAETPPPNEKPTVFHSLCRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPS
NILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMTS
DMLEDLRSKAEGKLASKHLHIDEYDEPHEKKRRTVPKVKKIGIAEQFKAPDLSNVSKVSN
VFEDVEFCVMTGTGDHSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVRNIIASNK
YDVVRAEWLLQCFQTKTLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLKEV
FSRVKDNTVVPLDAIAELEERYSWNSCQLSMFRGNTIYVDCYAVVNEPRTKIHGSTLSIR
ALELRFYGAKVVSHLEEGVSHVVIGEDHSRVKELKALRRTFGKKFKIVSELWVTESVKEG
VPKNENQYLI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacacctgcttcgcagtcttctaaaaaaacagtggcctctcaggtgcctttt
gcacatctgtgttctactctggagcgaatacagatgtgtaaatctcgcccggagaaatac
aagtatttcaaggatttcctggattcctggagaaaattccatgatgctcttcataaaaag
gagaaagatgtcacggattctttttatccagcaatgcgacttattcttccacagttagaa
agagaaaggatggcctatgggattaaagaaactatgcttgcgaagctgtatattgaactg
cttaatctaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacaccggct
ggttcacgtggagatgctggagattttgcaatgatcgcgtactttgtgttaaaacctagg
agcccaaaacaaggcaggctgtcaatagaacaagtcaatgaacacttagatacaatagct
aataataatgctgctaaaaacaaaggtctgttaaagaaaagtcttctccagttaattacg
cagagcacagcactggaacagaaatggctcattcggatgattataaaggatctaaagctt
ggtgttagtcaacaaactatattttccatttttcatcctgatgctgctgaattacacaac
gtcacaactgatttggaaaaagtctgcagacaactgcatgatccgtctgtctcgcttagc
gatgtttctatcatgttgttttctgcctttaaaccgatgcttgctgctattgctgatgtc
cagcaaattgagaaacagatgaataaccagatattttacatagaaactaagctggatggt
gaacgtatgcagatgcacaaagatggagatgtgtataaatatttttcccgaaatggattt
gactatactcagcagtttggtgcttccccccttgaaggttcattaacgccatttattcat
actgtatttaagagcagtatacaaaattgcattcttgatggtgaaatgatggcttacaat
cctgagacgcaaacctttatgcaaaaaggaaacaggtttgacataaaaagaatggtggag
gactctgatctgcagacctgcttctgtgtgtttgatgtattgatggttaacgataagaaa
ttgggtcacgaagtactaagcaaaagatatgaaatcttaagtagtgtatttaccccggta
acaggcaggatacaagttgtacataaaaaaagtgccagaacgaggaaagaagtaattgat
gctctaaatgaagcaatagataacagagaggaagggattatggtgaaagatcccatgtcc
acctacaagcctgacaaacgcggggaaggctggttaaaaatcaagccagaatacgtcacg
gggctgatggatgaactcgaccttttaattgttggtggttactgggggacgggctcgcgt
ggtggcatgatgtctcatttcctgtgcgctgtggcagagacgccccctccaaatgaaaaa
cctactgtcttccactccctttgtcgtgttggctctggctatactatgaaggaattgtat
gatttaggtttgaaactggctaaacactggaagccctaccacaggaaggaccctccctct
aacattttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtcata
gttcagatcaaagcagccgagattgttaacagtgacatgtacaagactgactgtactttg
agattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgacttca
gacatgttagaagatctcagaagcaaagcggaagggaagctggcatctaagcaccttcat
atagatgagtatgatgagccacacgagaaaaaaaggagaactgtaccaaaagtgaagaaa
attggaatagctgagcaatttaaagctcctgatctttctaatgtaagcaaggtttcaaat
gtatttgaagatgttgagttttgtgttatgacaggaacaggagaccactccaagtccgaa
ctggaaagcagaatagccgaatgtggtggcagcgtggtacagaacccggggccggagact
tactgtgtcattgtaggagctgagaacgtcagagtgagaaacatcattgcttccaacaaa
tatgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaacactggtgcct
tggcagccagcctttatgattcacatgtctcctgacacaaaagaacattttgctcgcgag
tatgattgttatggagacagctacacagcagacacagatgttgcacaactcaaggaagtg
ttctcgagagtgaaggacaatacggtggtgcctttggacgcgattgcagagttagaggaa
cgctattcatggaacagctgtcagctcagtatgttcagaggaaacactatttatgtggac
tgctatgctgtagttaatgagcccagaaccaaaatccatggatcaacactatcaattaga
gctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggtgtctcc
catgttgttattggagaagatcattctcgggtaaaagagctgaaagcactcaggagaaca
tttgggaaaaaattcaaaattgtatctgagctgtgggtaacagaatcggtgaaggaagga
gtcccaaagaatgaaaatcagtacttaatttaa
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