Mesitornis unicolor (brown roatelo): 104547487
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Entry
104547487 CDS
T08455
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mui
Mesitornis unicolor (brown roatelo)
Pathway
mui03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mui00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104547487 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mui03041
]
104547487 (EFTUD2)
Spliceosome [BR:
mui03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104547487 (EFTUD2)
Complex C
U5 SnRNP specific factors
104547487 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
FANCL_d3
PDEase_I
Motif
Other DBs
NCBI-GeneID:
104547487
NCBI-ProteinID:
XP_010191496
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
ESSEAKQFSPACVVTKSPESETRLQPGAGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTS
SSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKF
FGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYS
TDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNR
VPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKM
LDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFC
ETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYD
WDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDEL
IRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCV
SAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHH
WQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAK
QDVVLNYPM
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
gagagctcagaagcgaagcagttcagccctgcctgcgttgtcacaaagtctcccgagtct
gagactcggctgcagccgggcgcaggagacatcaattaccaggagtttgcaaagcggctt
tggggtgacatctacttcaaccccaagacccgcaagttcactaaaaaggccccaacgagc
agctcccagcgcagttttgtggagttcattctggagcccctgtataagatcctggctcag
gtggtgggagatgtggacacgaccctgcccaggactctggatgaacttggcatccacctg
accaaagaagaattgaagttgaacatccggcccctcctgcggctcgtctgcaagaagttc
tttggggagttcacaggctttgtggacatgtgtgtgcagcacatcccctcgccgaaggtg
ggagccaagacgaagatcgagcatacctacaccggcggtgtcgactctgacctgggggag
gccatgagcgaatgcgaccctgacggtccactgatgtgtcacaccacaaaaatgtacagc
acggacgatggcgttcagttccacgcctttggcagagtgctcagtggtaccatccatgct
gggcagcctgtgaaggtccttggagaaaactataccctggaagatgaggaggattcccag
atctgcaccgttggacgcctctggatctcagttgcgaggtaccacattgaggtgaaccga
gttcctgctggcaactgggtgctgatagaaggagtggaccagcccatcgtgaagactgcg
actgtcacggagcctcgtggcaatgaggaggctcagatcttccgtcctttgaagttcaac
accacatctgttatcaagatagctgtggagccagtcaacccctcagagctccccaaaatg
ttagatggtctccgcaaagtcaacaagagttacccctcgcttacgactaaggtggaggag
tctggggagcacgtgatcctggggacgggggagctctacctggattgtgtgatgcacgac
ctgcggaagatgtattcggagatcgatatcaaggtcgccgatcccgttgtgacattctgc
gagacagtggtggaaacgtcctccctcaagtgctttgctgagacccccaacaagaagaac
aagatcacgatgattgctgagcctctggagaagggacttgcggaggacattgaaaatgaa
gtggtgcagataacgtggaacagaaagaagctgggtgaattcttccagaccaaatatgac
tgggatttgctggctgcccgctccatctgggcctttgggccagatgccactggcccaaac
atcctggtggatgatacactgccctctgaggtggacaagtctctgctgggctctgtgaag
gacagcattgtgcagggatttcagtgggggaccagggaaggacctctctgtgatgagctg
atccgcaacgtgaagtttaagatcctggatgcggtgattgctcaggagcccttgcaccgg
ggtggaggacagatcatcccgacggcccgcagagtggtctattctgctttcctgatggcc
acccctcgcctgatggagccgtactacttcgtggaggtgcaggctcctgccgactgcgtg
tctgcggtgtacacggtcctggccaggcgcagaggccatgtgacacaggatgccccgatc
ccgggctctcctctctacaccatcaaagccttcatcccggccattgattcattcgggttc
gagacagacttgaggacccacacgcagggacaagccttctcgctctctgtcttccaccac
tggcagattgtgcctggtgaccccttggataagagcatcgtcatccgaccgctggagccc
cagccagccccgcatctggccagagagttcatgatcaagaccaggcgtaggaagggcttg
agcgaggacgtgagcatcagcaagttcttcgatgaccccatgttgctggaactggccaaa
caagacgtcgttctcaactaccccatgtga
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