Mycobacterium ulcerans: MUL_1933
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Entry
MUL_1933 CDS
T00435
Symbol
ligA
Name
(GenBank) DNA ligase [NAD dependent] LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mul
Mycobacterium ulcerans
Pathway
mul03030
DNA replication
mul03410
Base excision repair
mul03420
Nucleotide excision repair
mul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUL_1933 (ligA)
03410 Base excision repair
MUL_1933 (ligA)
03420 Nucleotide excision repair
MUL_1933 (ligA)
03430 Mismatch repair
MUL_1933 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mul03032
]
MUL_1933 (ligA)
03400 DNA repair and recombination proteins [BR:
mul03400
]
MUL_1933 (ligA)
Enzymes [BR:
mul01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MUL_1933 (ligA)
DNA replication proteins [BR:
mul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MUL_1933 (ligA)
DNA repair and recombination proteins [BR:
mul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MUL_1933 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUL_1933 (ligA)
MMR (mismatch excision repair)
DNA ligase
MUL_1933 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUL_1933 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Auto_anti-p27
BRCT_2
DUF8259
Motif
Other DBs
NCBI-ProteinID:
ABL04388
Pasteur:
MUL_1933
UniProt:
A0PPW9
LinkDB
All DBs
Position
2137125..2139176
Genome browser
AA seq
683 aa
AA seq
DB search
MLRQWQELAEQVREHQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPTQLVG
GAGFATEFEPVEHLERMLSLDNAFNTEELTAWAGRIHADVGDSAAYLCELKIDGVALSLV
YEGGRLTRASTRGDGRTGEDVTLNARTIEDVPERLSHSEDHRMPEVLEVRGEVFFRVADF
QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHTEGFRPATLHQA
YLALQAWGLPVSQHTTLVADLAEVQARIDYWGEHRHEVDHEIDGVVVKVDDVALQRRLGS
TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVAQATLHNAS
EVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPECGTPLAPEKEGD
ADIRCPNTRSCPGQLRERVFHVSSRNALDIEMLGYEAGAALLSARVIGDEGDLFGLTEEE
LLRTDLFRTKAGDLSANGRRLLANLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSI
DAIVAATTEQLAAVEGVGPTIASAVSEWFTVDWHREIVERWRAAGVRMADERDDSVPRTL
AGVTVVVTGSLPGFSRDEAKEAIVTRGGKAAGSVSKKTSYVVAGDAPGSKYDKAVELGVP
ILDEDGFRKLLEQGPPAEAGEPT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcggcagtggcaggaactggccgagcaggtgcgtgaacaccagtttcgctactac
gtgcgcgacgcgccggtgatcaccgacgcggaattcgacgaattgctgcgccggctggag
gcgctcgaagaacagtatcccgagctacgcacacccgattcgcccactcagctggtcggt
ggcgccggtttcgcgaccgagttcgaacccgtcgagcatctggaaagaatgctcagcctc
gacaacgcgttcaacaccgaggaactcaccgcctgggccggccgcatccacgccgatgtc
ggcgacagtgcggcctatttgtgtgagctcaagattgacggcgtggcgctgtcgctggtg
tacgaaggggggcggctgacccgggcctccacccggggcgacggtcgcaccggcgaagat
gtcacgctcaatgcccgcaccatcgaggacgttccggaacggctttcccacagcgaggac
caccgcatgcccgaggtgctcgaggtccgcggtgaggtgttctttcgggtggctgatttc
caggcgctcaacgcgagcttggtcgaggagggcaaggcaccgttcgccaacccccgcaac
agcgcggccgggtcgttgcggcaaaaggacccggcggtcacggcccggcgcagattgcgg
atgatctgccatgggctgggccacaccgaaggctttcgcccggcgacgctgcaccaggcc
tacctggcgttgcaggcctgggggctgccggtttctcagcacaccacgctggtcgccgac
ctggccgaggtacaggcgcgcatcgactactggggcgagcatcgccacgaggtcgaccac
gaaatcgacggcgtggtggtcaaagtcgacgatgtcgccctgcagcggcggctcggttcc
acctcacgggcaccgcgctgggcgatcgcgtacaagtacccgcccgaggaagcccagacc
aagctgctcgatattcgggtcaacgtcggccgaaccgggcgagttacgccgtttgcgttc
atgacgccggtgaaggtcgcgggctcgacggtggcacaagccaccttgcacaacgcgtcg
gaggtcaagcgcaagggcgtgctgatcggcgacacggtggtgatccgcaaggccggtgac
gtgatccccgaagtgttgggtccggtggtcgacctccgtgatgggtccgaacgcgaattc
gtcatgcccacaacgtgtccggagtgcggcacgccgctggctccggagaaggagggcgac
gccgacatccgctgtccgaatacccgcagctgtccggggcagttgcgggagcgggttttt
catgtctccagccgcaatgccctcgacatcgagatgctgggctatgaggctggcgccgcg
ctgctttcggcgcgggtgatcggcgatgaaggcgacctgttcgggctcaccgaggaagag
ctgcttcgcaccgacctgttccgcaccaaggccggtgacttgtccgccaacggccggcgg
ctactggccaatctggacaaggcgaaggcggcgccactatggcgcgtgctggtggcgttg
tccatccgccatgtcggaccgacagcggcacgcgcactggccaccgagttcggcagcatc
gatgcgatcgtcgccgcgaccaccgaacagttggccgccgttgagggagtgggaccgacg
atcgcctccgccgtttcggagtggttcaccgtcgactggcaccgcgagatcgtcgagagg
tggcgggccgccggtgtgcggatggccgatgagcgcgacgacagtgtgccgcgcacactg
gccggggtaaccgtggtggtcaccggctcgttgcccggattctcacgggacgaggccaag
gaggcgatcgtgacccgtggcggcaaagccgccggttcggtatcgaaaaagacctcctac
gtcgtcgccggtgacgcacccggctcgaagtacgacaaggcggtcgaactcggcgtgccc
atcctcgacgaagatgggtttcgaaagttgttggagcagggccccccggccgaagcgggg
gagccgacctag
DBGET
integrated database retrieval system
