Pseudoduganella umbonata: FCL38_12695
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Entry
FCL38_12695 CDS
T06138
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00020
Citrate cycle (TCA cycle)
mum00785
Lipoic acid metabolism
mum01100
Metabolic pathways
mum01110
Biosynthesis of secondary metabolites
mum01120
Microbial metabolism in diverse environments
mum01200
Carbon metabolism
mum01210
2-Oxocarboxylic acid metabolism
Module
mum_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mum_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FCL38_12695
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FCL38_12695
Enzymes [BR:
mum01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
FCL38_12695
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QCP11174
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Position
complement(3103272..3106127)
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AA seq
951 aa
AA seq
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MMQQQTSNSYLFGGNAPYVEELYEAYLENPGSVPDNWRAYFDSMQHVPAVDGSNKPDVNH
SSVIASFAERAKAGPIRTVTATADAEMGRKRVAATQLIAAYRYLGSRWANLDPLQRQERP
AIPELDPTSYGFTDADMDTVFNISNTYFGPETASLRDLLNYLRETYTRSIGAEFMYISDP
AEKRWLQERLESIRSTPNFTAEKKKHILERLTAAEGLERYLHTKYVGQKRFSLEGGETFI
ASMDEIIQRAGEKGVQEIVIGMAHRGRLNVLVNTLGKAPKDLFEEFEGKHGDDLPAGDVK
YHQGFSSDISTAGGPVHLSLAFNPSHLEIVNPVVEGSVKARMDRRGDTQGAQVLPILVHG
DAAFAGQGVVMETLNLAQTRGYGTGGTVHIVINNQIGFTTSDPRDARSTIYCSDVVKMIE
APVLHVNADDPEAVVLASQIALDYRAQFQKDIVVDIICFRKLGHNEQDTPALTQPLMYKK
IAQHPGTRRLYADKLSAQGVIPADGGDQMVAAYRAAMDAGKHTVDPVISNFKNKFAVDWL
PFLNRKWTDAADTAVPLTELKRLAGRITTVPEGFKVHSLVEKVLADRANMGKGEQNLDWG
MGEHLAYASLVSSGYAVRLTGQDAGRGTFTHRHAVLHDQNRERWDAGTYVPLQNISENQA
PFTVIDSVLSEEAVLGFEYGYSTAEPNTLTIWEAQFGDFVNGAQVVIDQFISSGEVKWGR
ASGLVMLLPHGYEGQGPEHSSARPERFLQLCAENNMQVVQPTTAAQIFHLLRRQMVRQFR
KPLVVMTPKSLLRNKDAGSPLSELAKGAFQTVIGETDDKIDAKKVKRVIACSGKVYYDLA
NARKTRGQLDTAIIRVEQLYPFPHKAFAAELKKFPALTEVVWAQDEPQNQGPWFQIQHNI
FESMDAGQRLAYAGRPASASPAVGYYDKHYAQQKELLETAFSKLKGFILTK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaacagacgtccaactcctacctgttcggtgggaatgcgccgtacgtagag
gaactctacgaagcgtacctggaaaacccaggttccgtgcccgataactggcgcgcttat
ttcgactcgatgcagcacgtgcctgccgtcgatggatcgaacaagcccgacgtcaaccac
tcctccgtcatcgcctcgtttgccgagcgtgccaaggctggcccgatccgcacagtgacc
gcgacggccgacgccgagatgggccgcaagcgcgtggccgccacccagctgatcgcagcc
taccgttacctgggctctcgctgggccaacctggacccgctgcagcgccaggagcgcccg
gcgatcccggaactggatccgacgtcctatggcttcaccgatgcggacatggacaccgtg
ttcaacatcagcaacacctactttggcccggaaaccgcatcgctgcgcgacctgctgaac
tacctgcgcgaaacgtacacccgttcgatcggcgcggagttcatgtacatttccgacccc
gccgaaaagcgctggctgcaggaacgcctggaatcgatccgctccacgccgaacttcacg
gccgaaaagaaaaagcacatcctggaacgcctgacggccgccgaaggcctcgagcgctac
ctgcacaccaaatacgtgggccagaagcgcttctcgctggaaggcggcgaaacgttcatc
gcctcgatggatgaaatcatccagcgcgccggcgaaaagggcgtgcaggaaatcgtcatc
ggcatggcccaccgcggccgcctgaacgtgctggtcaacaccctgggcaaggcaccgaag
gacctgttcgaagaattcgaaggcaagcatggcgacgacctgccggccggcgacgtgaaa
taccaccagggcttctcgtccgacatctccaccgccggtggcccggtccacctgtcgctg
gcgttcaacccgtcgcacctggaaatcgtcaacccggtcgtcgaaggttccgtcaaggcg
cgcatggaccgccgcggcgatacgcagggcgcgcaagtgctgccgatcctggtgcacggc
gatgccgcattcgccggccagggcgtggtgatggaaacgctgaacctggcgcagacccgc
ggctacggcacgggcggcacggtgcacatcgtgatcaacaaccagatcggcttcaccacc
tcggacccgcgcgatgcgcgttcgacgatctactgctccgacgtcgtgaagatgatcgaa
gcaccggtgctgcacgtgaatgccgacgatcccgaagcggtggtgctggcttcgcagatc
gcactggactaccgcgcgcagttccagaaggacatcgtggtcgacatcatctgcttccgc
aagctgggtcacaacgagcaggacaccccggcgctgacgcagccgctgatgtacaagaag
atcgcgcaacacccgggcacccgccgcctgtacgccgacaagctgtcggcccagggcgtg
atcccggccgacggcggcgaccagatggtggctgcttaccgcgccgcgatggacgccggc
aagcacaccgtcgacccggtcatctcgaacttcaagaacaagttcgccgtcgactggctg
ccgttcctgaaccgcaagtggaccgatgcggccgacaccgccgtgccgctgacggaactg
aagcgcctggccggccgcatcaccaccgtgccggaaggcttcaaggtgcactcgctggtt
gaaaaagtgctggccgaccgcgccaacatgggcaagggcgagcagaacctggactggggc
atgggcgaacacctggcctacgcttcgctggtctcgtccggctacgccgtgcgcctgacc
ggccaggatgccggccgtggcacgttcacgcaccgccacgccgtgctgcacgaccagaac
cgcgaacgctgggatgccggcacctacgtgccgctgcagaacatctccgagaaccaggca
ccgttcaccgtgatcgactccgtgctgtcggaagaagcggtactgggcttcgaatacggc
tactcgaccgccgagccgaacacgctgacgatctgggaagcccagttcggcgacttcgtc
aacggtgcccaggtcgtgatcgaccagttcatcagctccggcgaagtgaagtggggccgc
gcttccggcctggtgatgctgctgccgcacggctacgaaggccagggtccggagcactcc
tccgcccgcccggaacgtttcctgcagctgtgcgcggagaacaacatgcaggtggtgcag
ccgaccaccgcagcgcagatcttccacctgctgcgccgccagatggtgcgccagttccgc
aagccgctggtcgtgatgacgccgaaatcgctgctgcgcaacaaggatgccggttcgccg
ctgtccgagctggccaagggcgcgttccagaccgtgatcggcgagaccgatgacaagatc
gatgcgaagaaggtcaagcgcgtgatcgcctgctccggcaaggtgtattacgacctggcc
aacgcccgcaagacccgcggccagctcgacacggccatcatccgtgtcgaacagctgtac
ccgttcccgcacaaggcgttcgccgccgaactgaagaagttcccggcactgaccgaagtg
gtgtgggcgcaggacgagccgcagaaccagggtccatggttccagatccagcacaacatc
ttcgagtcgatggatgcgggccagcgcctggcgtatgccggccgcccggcctccgcatcg
ccggctgtcggctactacgacaagcactacgcccagcagaaagagctgctggagacggcg
ttctcgaagctgaagggcttcatcctgaccaagtaa
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