Pseudoduganella umbonata: FCL38_25620
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Entry
FCL38_25620 CDS
T06138
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00300
Lysine biosynthesis
mum00550
Peptidoglycan biosynthesis
mum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FCL38_25620
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FCL38_25620
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mum01011
]
FCL38_25620
Enzymes [BR:
mum01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FCL38_25620
Peptidoglycan biosynthesis and degradation proteins [BR:
mum01011
]
Precursor biosynthesis
Amino acid ligase
FCL38_25620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QCP13437
UniProt:
A0A4P8HTZ5
LinkDB
All DBs
Position
6077925..6079466
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AA seq
513 aa
AA seq
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MTNMNKNDDIDKIGNWIREAAPNGQLASDSRRIRPGDIFFAYPGDAGDGRNFIERAIEQG
AAAVLYDPQGFAWNEEWRVAGLPVANLKQQAGPIAHAVYGMPDAGMFTVGITGTNGKTSS
AVWLGHALSRAGETAAVIGTLGVGLFHGRTEPEFTATGYTTPDQVLLARTLDECRAAGAR
ALAIEVSSIGLEQGRVAGMHFDVALFTNLTRDHLDFHGSMEAYEAAKQKLFAWPGLKAAV
INLDDPAGVRMASQVRDAKVIGYTLRSEAEVAGAAAQVPGMALLRASQVRSRSAGTEFHL
DSPYGAAQVKTRLVGAFNVSNALGVLGALLAKGMPLRAAVDAIEALTPAPGRMQLVGGND
APMVVIDYAHTPDALEKTIEALRPVATDRGGQLWCVFGCGGDRDPGKRPQMGRIAQAADH
VLVTSDNPRSEDPHAIIAQIVAGMDAARPAQAIEDRAAAILSAVKHAAKNDVILVAGKGH
EPYQEIKGKKLPFSDADHAQLALTARLTMMRSN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacatgaataaaaacgacgacatcgacaagatcggtaactggatcagggaagcg
gcgccgaacggccagctggcttcggactcgcgccgcatccggccgggtgacatattcttc
gcctacccgggcgacgccggcgacggccgcaacttcatcgagcgggccatcgagcagggc
gccgcggccgtgctgtacgacccgcagggattcgcctggaatgaggaatggcgcgtggcc
ggcctgccggtggcaaacctgaagcagcaggccggtccgatcgcgcatgccgtgtacggc
atgccggacgcaggcatgttcacggtcggcatcacgggcaccaacggcaagacgtcgtcg
gccgtgtggctgggccatgcactgtcgcgcgccggcgaaaccgcggccgtcatcggcacg
ctgggcgtaggcctgttccatgggcgcaccgagcccgaattcacagccaccggctacacc
acgccggaccaggtgctgctggcccgcacgctggacgaatgccgcgccgccggcgcccgc
gcgctggcgatcgaggtgtcgtcgatcggcctggagcagggccgcgtggcgggcatgcat
ttcgacgtggcgctgtttacgaacctgacgcgcgaccacctcgattttcatggttcgatg
gaagcctacgaagcggccaagcagaagctgtttgcctggcccggcctgaaggccgccgtg
atcaacctggacgatccggccggcgtgcggatggcctcgcaggtgagggatgccaaggtg
atcggctacaccttgaggagcgaggccgaggttgccggcgcggctgcgcaggtgccaggc
atggcgctgctgcgcgccagccaggtcaggagtcgcagtgccggcaccgagttccacctc
gattcgccgtatggcgccgcgcaggtgaagacacggctggtgggcgcgttcaacgtcagc
aacgcgctgggcgtgcttggtgcgctgctggcgaagggcatgccactgcgcgccgccgtc
gatgcgatcgaagcgttgacgccggcgccgggccgcatgcagctggtcggcggcaacgat
gcgccgatggtcgtcatcgattacgcccacacgcccgatgcgctggaaaaaaccatcgag
gcactgcgcccggtggccaccgaccgcggcggccagctgtggtgcgtgtttggctgcggc
ggcgaccgcgacccgggcaagcgcccgcagatgggccgcatcgcgcaggcggcggaccac
gtgctggtgaccagcgacaatccgcgcagcgaagatccgcacgcgatcatcgcgcagatc
gtggcaggcatggatgccgcccgtcccgcgcaggcgatcgaggaccgtgccgccgcgatc
ctttccgccgtcaagcacgcggcgaagaacgacgtgatcctggtggccggcaagggccat
gaaccgtaccaggaaatcaagggcaagaaactgccgttctccgatgccgaccacgcccag
ctggcgctgacggcccgattgacgatgatgaggtcgaactga
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