Meriones unguiculatus (Mongolian gerbil): 110558714
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Entry
110558714 CDS
T05884
Symbol
Smchd1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mun03036
]
110558714 (Smchd1)
03400 DNA repair and recombination proteins [BR:
mun03400
]
110558714 (Smchd1)
Chromosome and associated proteins [BR:
mun03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110558714 (Smchd1)
DNA repair and recombination proteins [BR:
mun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
110558714 (Smchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
SMC_hinge
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110558714
NCBI-ProteinID:
XP_060224136
LinkDB
All DBs
Position
15:10274302..10387207
Genome browser
AA seq
1995 aa
AA seq
DB search
MAAAGASEPGRLSAASHRDGAVDGSRTVYLFDRRGKECELGERSLQVSERTTYARFRASV
CQTIGISSEEKFVITTTSRKEITRDNFDETVKDGVTLYLLQSVDQSLLTATKERIDFLPH
YDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSQNVGVRRIQIKLLFDEIQGKPAV
AVVDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGK
QAVFFVGQSARMISKPVDSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPADSVHITN
DDERFLHSLIAEEKEKDSFTAVVITGVQPEHIQYLKNYFHLWTRQLTHIYHYYIHGPKGN
EVNTGKEGGSFNNIDIEISLFEKGKTPKIVNLREIEDDMQTLYINTASDSFEFKAHVEGD
GVVEGVIRYHPFLYDRETYPDDPCFPSKLRDEEDDDDCIILEKAARGKRPIFECFWNGRL
IPYTSVEDFDWCAPPKKRGLAPIECFNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNT
LFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGIITRPDLPSKKQGPWAAYA
AIEWDGRVYKAGQLVKTIKTLPLFYGSILRFFLYGDHDGEVYATGGEVQIAVEPQALYDE
IKTVPIAKLDRTVAEKTIRKYVEDEMAKLPDRLSITWPEGDELLPNEIRPAGTPIGALRI
EILNKKGEAMQKLPGPSHGGSKKLLVELKVILHTSSGNKEIISHISQHGGKWPYWFKKME
NIQKLGNYTLKLQVVLNESNADTYAGRSLPSKAIKFSVKEGKPEKFSFGLLDSPFRVGVP
FNIPLELQDEFGHPTQLLSDIQPVLEASGLSLHYEEITRGPKCVIQGVIAKGPVNSCQGK
NFNLKVILPGLKEDSQILKIRLLPGPPRQLKVKPDSEILVIENGTAFPFQVEVVDESDNI
TTQPKLIVHCKFLGAPSLPVYTVDCSSSGTSILTGSAIQVQNIKKDQTLTARIEIPSCKD
VLPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMRNLIFQMYDEGERE
INITPSLAEKIKVNWTPEVNKEHLLQGLLPDVQVPTSVKDGRYCQVSFQDDHVSLESAFT
VRPLPDDPKHLKCELKGDKTVQMGQELQGEIVVIVTDQYGNQISAFSPDSLSALSIAGVG
LDSSNLKTTLEASTQSISVRGIRFTPGPPGHKDLCFTWREFSDFIRVHLVSGPPTKLLLI
DWPELKESIPVINGRQLQNPLIVQLCDQWDNPALVPNIKLSLTKASSLKLIPSNQQHKTD
DKGRANLGVFTVSAPRGEHTLQVKGVYNKSTIEGPTIKLMILPDPEKPIRLNVKYDKDAS
FIAGDIFTDFMVSVISESGSVIKNINPTRISMKMWKLSSLSRPPTNAETFSCNKIKDNDK
EEGCFYFREKAIPHKVGTYCIQFEFMIDKTNILSSEQVIVDVLPNQPMKLVPDIQPATPA
VSNVRSVASRTLVKNLHLSITDNYGNHTGMNLVGTVVATIKGFNEEDTDTPLFIGKVRTL
EFPFVNGCAEITSLVLAENSPGRDSTEYFIIFEPRLSALSRTLESYRLPFMFYNDVKKQQ
QMAALTKEKDQLSKSIVLYRSLFDANKQLLDEMKCQVEEARLKEAQLRNELKAHNIDIPA
TQQIPHIEALLEKKIIEQNELSKRPRRSCTLPNYSKRSGEILGKIAHLAQIEDDRAAMVI
SWHLASDMDCVVTLTTDAARSIYDETQGRQQVLPLDSIYRKTLPDWKRPLPHFRNGKLHF
KPFGDPVFARSLLTFPDNIEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLT
RDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPIPRQCIVLGKQIDLIQQYRTALCKLNS
VNQDLNTQLQYLHTPDMKRKKQELDEQEKSLKIIEQKLGMTPTPKIELTECPIPAKRMRR
ETTRQNRRSKGDIPN
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgggcgcgagcgagcccggccgcctctcggcggcgtcccacagggatggc
gccgtcgacggctctaggacggtgtacttgttcgaccggcgcgggaaggagtgtgagctc
ggggagcgctcgctgcaggtctcggagcgcacgacctacgcgaggttccgcgcttctgtg
tgccagacaattggtatttcatctgaagaaaaatttgttattacaactacaagtaggaaa
gaaattacccgtgataattttgatgaaactgttaaagatggagtcactctgtacctgcta
cagtcagttgaccagtctctgttgacagcgacaaaagaaagaattgacttcctacctcac
tatgacactctggttaaaagtggcatgtatgaatattacgcaagtgaaggacagaaccct
ttgccatttgctcttgcagaattaatcgacaattcattgtcagctacttctcaaaatgtt
ggtgttaggagaatacagatcaaattgctttttgatgaaatacaaggaaaacctgctgtt
gcagtggtagataatggaagaggaatgacttctaaacagcttaacaactgggctgtgtac
aggctgtcaaaattcacaagacaaggtgactttgaaagtgatcattcagggtatgttcgg
ccagtaccagtacctcgcagcttgaacagtgatatttcctattttggtgttggaggcaaa
caggctgttttctttgttgggcaatcagctagaatgataagcaaacctgtagactcccag
gatgttcatgagcttgtgctttctaaagaagattttgagaaaaaggaaaaaaataaagaa
gcaatatatagtggctacattagaaacagaaagccagctgattctgttcacattacaaat
gatgatgaaagattcctacacagtctcattgcagaggagaaagagaaagatagctttact
gctgtggtcattactggggtgcagcctgagcatatacagtacttgaaaaactattttcat
ctctggacacgacagttaacgcatatttatcattactatattcatggaccaaaaggaaat
gaagtaaatacaggaaaagaaggtggatcttttaacaatattgatattgaaatttctttg
tttgaaaaagggaagacacctaagattgtcaacctaagggaaatagaagatgacatgcag
accttgtatataaatactgcatctgatagttttgagttcaaggctcacgttgaaggagat
ggtgtagtggaaggggttattcgataccatccttttttatatgatagagaaacctatcct
gatgatccatgctttccatcaaaattaagagatgaagaagatgatgatgattgtattata
cttgagaaagcagcaagagggaaaagaccaatttttgaatgtttttggaatggacggtta
ataccatatacatcagttgaagactttgactggtgtgctcctcctaagaagagagggctt
gccccaattgagtgctttaatagaatatctggtgcattattcactaatgacaagtttcag
gtcagcacaaataaactgacatttatggatcttgagctgaaattgaaagataagaacacc
ctttttacaagaattttaaatggacaggagcagagaatgaaaatcgacagagagtttgct
ttatggctgaaggactgtcatgaaaagtatgacaaacaaataaaatttacactttttaaa
ggaataattacccgtcccgatcttccctctaaaaagcaaggcccctgggcagcgtatgca
gcaatcgaatgggacggaagagtgtacaaagcaggacagctggtcaagacaatcaagaca
cttcctctcttttatggaagcattttaagattttttctttatggtgatcatgatggagaa
gtgtatgctacaggaggtgaagttcaaattgcagtggaaccccaagcgctgtatgatgaa
ataaaaactgtgcccattgcaaagctggataggacagtagctgagaaaacaattaggaaa
tacgtagaagatgaaatggcaaagctccctgatagattatctataacttggcctgaagga
gatgaattattaccaaatgaaattagacctgctggaaccccaattggtgcgttaagaatt
gaaatactaaacaaaaagggggaagcaatgcagaagctcccaggaccaagtcatggagga
tcaaagaagctgctggttgaacttaaagttatactacacacttcaagtggaaataaagaa
atcatttcacatatcagtcaacatggaggaaaatggccttattggtttaaaaaaatggaa
aatatccagaaactaggcaattacacattgaaattacaagtggtattgaatgaaagtaat
gcagacacctatgcaggacgatcactaccatctaaagcaattaaattttctgttaaagag
ggcaagcctgagaagttttcatttggtcttctggattccccttttcgtgttggagttcca
ttcaatattcctctggagttacaggatgaatttggtcaccctacccaactattatctgat
attcagccagttcttgaagcaagtggtctgtctttacattatgaagaaataaccagaggc
ccaaaatgtgtaattcaaggtgtcatagctaaaggtccggttaactcttgtcaaggaaag
aattttaatctaaaggttattcttccgggtttaaaagaagactcacagattttgaaaatt
agattgctacctggtccccctcgtcaactaaaagtgaaacctgactcagaaattctagtt
atagagaatggaacagctttcccatttcaggtggaagttgtggatgagtcagacaacata
accacacaaccaaaactgattgttcattgtaagtttctaggtgctccaagcctaccagtc
tacactgtggattgtagtagctctggaaccagcatcctaacaggatcagcaattcaagtt
cagaacattaagaaagaccagacactgaccgccaggattgagatacctagttgtaaagat
gtgttaccagtggaaaagactatcaaattacttcccagtagccacgttgctcgtctacag
atatttagtgtagagggacaaaaagcaatccagatcaaacatcaggatgaggttaattgg
atagcaggcgatataatgcgcaatctaatttttcaaatgtatgatgaaggagaaagagaa
atcaatatcacaccatccttggcagaaaagattaaagtcaactggacgcctgaggtcaac
aaggaacatttgctgcaaggcctgcttcctgatgtccaagtaccaacctctgtgaaagat
ggacgctactgccaggtgtctttccaagatgatcatgtgtctctggaaagcgcctttaca
gtaagacctcttcctgatgatcccaaacatttaaaatgtgagttaaaaggagacaaaaca
gtgcagatgggccaagagcttcaaggagaaatagttgtaatagttacagatcagtatgga
aatcagatttcggcattttcaccagattctttatctgctttgtcaattgctggagttgga
cttgatagctcaaacttgaaaactactttggaggcgagcacacagagtataagtgtgcga
ggcatcagatttactccaggtcctcctgggcataaggatctttgtttcacttggagagag
ttttctgactttattcgcgtgcaccttgtttctggacctccaaccaagctgctgcttatc
gactggccagagctgaaagagtccattccagtgattaatggaagacaattacagaatcct
ctcatcgttcaactttgtgatcagtgggataaccctgcattagtcccaaatattaaactg
agtctcacaaaagctagcagtttaaagctaataccttcaaaccaacagcataaaacggat
gataaaggcagagctaatttgggggtgtttactgtttctgctccaaggggagaacatact
ttgcaggttaaaggtgtctataataaaagtaccattgaaggacctacaattaaattaatg
attcttccagaccctgaaaaacctattcgtctcaatgttaaatatgacaaagatgcctct
tttatagcaggggatatattcactgattttatggttagtgtgatttctgaaagtggtagt
gtcatcaaaaatattaatccaacacgcatttccatgaaaatgtggaagctgagcagcctg
agccggccaccaacaaacgcagaaacatttagttgtaataaaataaaagataatgacaag
gaagaaggctgcttctatttcagggaaaaagcaatccctcacaaagtggggacatactgt
atccagttcgagtttatgattgataaaacaaatatactcagcagtgaacaggttatagtt
gatgtactgcctaatcagcctatgaagttggttcctgacatccaaccagctaccccagct
gtttctaatgttcgctcagttgccagtaggaccttggtcaaaaacctacatctcagtatt
acagataattatggtaatcacactgggatgaatctggttggcactgtggtagctaccatt
aaaggctttaatgaggaggacactgataccccactcttcattgggaaggttaggacactt
gagtttccctttgtgaatggttgtgctgaaattacgagtctagtgctggcagaaaatagt
cctggaagggatagtactgaatattttattatctttgagcctcggctgtcagctttatca
agaacgttagaatcctatagactgccgtttatgttttacaatgatgttaaaaaacagcaa
caaatggcagcacttacaaaggaaaaggaccagttatctaagtccatcgttctctataga
agtctctttgatgccaacaagcagcttcttgatgaaatgaaatgccaagttgaagaagca
agattaaaagaggcccagctacgaaatgaactaaaagcacacaatattgatattcctgca
acacaacagatacctcacattgaagcacttttggaaaaaaagataatagaacagaatgaa
cttagtaaaaggcccaggagatcgtgtactcttcccaactacagtaaacgcagcggagag
attctgggaaagattgcacatctagcccaaattgaagatgatcgagctgcaatggttatt
tcttggcacctggcaagtgacatggactgtgtggtcaccctaaccactgacgcagcacgc
tctatctatgatgagactcagggtcgtcagcaagtgttgccccttgattctatctataga
aaaactcttccagattggaaaagacctctacctcatttccgaaatggtaaattacatttt
aagcccttcggagatccagtctttgctcgaagtttgctaacattcccagataatattgaa
cattgtgaaacagtttttggtatgctgttgggagacaccattattttggataatctagat
gcagccaatcattatagaaaagaggttgttaaaatcacacactgtcccacactactgact
agagatggagatagaattagaagtaatgggaagtttgggggccttcagaataaagctcct
ccaatggacaaactccggggaatggtcttcggagctccaataccaagacagtgcatagtc
ttggggaaacaaattgatcttatccaacagtaccgcaccgctttgtgcaagctgaacagt
gtgaaccaggacttgaatactcagctgcagtaccttcatactcctgacatgaagaggaaa
aagcaagaactcgatgaacaggaaaaaagcctgaaaataatagagcaaaaacttggaatg
actcctacaccaaagattgagttgacagagtgtccaattcctgctaaaaggatgagaaga
gaaaccactagacaaaataggaggtcaaaaggtgatataccaaactga
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