Microcaecilia unicolor: 115463329
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Entry
115463329 CDS
T09142
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
muo
Microcaecilia unicolor
Pathway
muo04622
RIG-I-like receptor signaling pathway
muo04623
Cytosolic DNA-sensing pathway
muo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115463329 (DDX58)
04623 Cytosolic DNA-sensing pathway
115463329 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115463329 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
muo04054
]
115463329 (DDX58)
Enzymes [BR:
muo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115463329 (DDX58)
Pattern recognition receptors [BR:
muo04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
115463329 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
HEWD
SNF2-rel_dom
CapR
Motif
Other DBs
NCBI-GeneID:
115463329
NCBI-ProteinID:
XP_030049593
UniProt:
A0A6P7XAS5
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All DBs
Position
2:complement(224595121..224698211)
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AA seq
949 aa
AA seq
DB search
MRPDEKQSLELFRSYLESTLSPTYILSYMNSWLTEQDASELAAVEEKKGPTTATSVFLER
LLQLEAEGVFRGFLDGLRNAGYTGLYDALENQDFQKIETLVKYRTILRKLEPSIKNNIKP
TEMIPHLNDCILPRECEEVMQIAENRGPIAGSEKLIACLLRSDKEVWPKSFQLALEIENC
ACMHLWDIRGDNEETASKISEDEQDENDVTSIAFHYEEKSENANLCSSLGTTVLTNDTGT
CTPKTAEGSQDLAHGNILRQYQRELAKPGLEGKNVIICSPTGSGKTIVALAICEHHFKTM
PKGKRGKVVFLATKVPVYEQQREIFKKHFENKGYTVVGISGETSESVPVGEVICNSDIIV
LTPQILVNSLKHGSVSCLSMFSMMIFDECHNTTKNHPYNVLMCNYLDLKLGPAPPKLPQI
IGLTASVGVGKSRNLNETKDYICRLGASLDTHVISTVRENVEDLEKYVCKPNKLIRQVEK
RQIDPFADIISKMMAETEELAKNVCPPLDDLSNIKNRSFGTQKYEQWIVDTQKKCRVLKM
ENKEEESLLCRTLFTYTEHLRKYNDALMINDDARTKDALAYLQEFFTNVRSGGFDTIEQE
LTKKFEDKLQELTKISEDKSNENPKLDDLAFILDEEYHMNPQTRTLLFVKTRALTTALKN
WIEESPQLRFLKPDVLIGRGKRDQNTGMTLPSQKGVLDSFKANGESKVLIATSVADEGID
IAQCNLVLLYEYVGNVIKMIQVRGRGRAEDSKCILVTSKREQAEKEELNHYQENIMNNAV
KELQRLSEEEFVKQINILQTTEKMIRDFKNCVIPTKPEGGNKRLLCSKCKAFACYTDDIR
VIQVSHHAVFDDSFATRFITKPHPKPKCFQGYQKKAKILCKEPKCHHDWGITGTYVTLQN
IPLIKIESFVVEDIETGEQKYFPRWVDVNFTMKDFDLEEMSKKAQANSQ
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggacgagaagcagagcctggaactcttcaggtcttacctggagagcaccctg
agtcccacctacatcctgagctacatgaacagctggcttaccgagcaagatgcttcagaa
cttgcagctgtagaagaaaaaaaggggcctacgactgcgacatcagtgtttcttgaacga
ctgcttcagttagaagcagaaggagtgtttcgtggatttttagatggcctgagaaatgca
ggctacactggcctttatgatgcactggaaaaccaagatttccaaaaaattgaaacccta
gttaaatataggacaattttgagaaagttagagccatctatcaaaaataacataaaacca
acagaaatgattcctcatctaaacgattgcattctacccagagaatgtgaggaggttatg
cagattgcagagaacagaggcccgattgcaggttcagaaaagctaattgcctgccttctc
aggtcagacaaggaagtatggcctaaatcctttcagttggctttagaaattgaaaactgt
gcttgtatgcatctgtgggacatacgaggagataatgaagagacagctagtaaaataagt
gaggatgaacaggatgagaacgatgttaccagtatagcattccattacgaagagaagtcg
gaaaatgcaaatctgtgttcatctttaggtacaacagtgcttacaaatgacactggaaca
tgtacaccaaaaacagcagaagggtcacaagacttggctcatggtaacatactacgacaa
tatcagagagaacttgccaagccaggcttagaaggaaaaaatgtaataatttgctcacca
acagggtctggaaaaactattgtggcacttgcgatatgtgaacatcattttaaaactatg
cccaaaggcaaaagaggaaaagttgtcttcctggccactaaagtaccagtgtatgagcag
caaagagaaatcttcaaaaaacattttgaaaataaagggtacactgtagtaggtatttct
ggagaaaccagtgaatcggtcccagtgggagaagtaatttgtaacagtgacatcattgta
ctgacaccacaaatccttgtgaacagtcttaaacatgggtcggtttcatgtctgtccatg
ttttcaatgatgatatttgatgagtgccacaacacaactaaaaatcacccttacaatgtt
ctaatgtgcaattatttggatttaaaactcggaccagctccaccaaaactgcctcagata
attggactgacagcttcagttggtgtgggtaaatccaggaacctcaatgaaacaaaggat
tacatttgcaggctgggcgctagcctagatacacatgttatatcgacagtcagagaaaat
gtggaagatttggagaaatatgtatgcaagccaaataaattgatcagacaagttgaaaaa
cgtcagatagacccctttgctgacatcatttcaaagatgatggctgagactgaggaactg
gcgaaaaacgtttgcccaccattagatgatctgtctaacattaagaatcgaagttttgga
actcagaaatatgaacaatggattgttgatactcagaagaaatgcagagtgttgaagatg
gagaacaaagaggaagaaagcttgttatgcaggacactctttacgtacactgaacacttg
agaaaatataatgatgctctcatgatcaatgatgatgcacgcacaaaggatgcactggca
tacctacaagaatttttcaccaatgtcagaagtggagggtttgatacgatagaacaggag
ttaacaaagaagtttgaagataaactacaggagctgactaagatatcagaagataaatca
aatgaaaatcccaaactggatgacctcgcctttatcttggatgaagaatatcatatgaac
ccacagacaaggacactcctctttgtaaagactagagctttaacaacagctttgaaaaac
tggattgaagaaagtcctcaactcagattcctgaaaccagatgtgctaataggccgtgga
aagagagatcaaaacacaggaatgaccctaccaagtcaaaaaggtgtcctggattcattc
aaagccaatggagaaagcaaggtgctgatagctacgtcagttgctgatgaaggaattgat
attgcacagtgcaaccttgtccttctgtatgaatatgttggtaatgtcataaagatgatt
caggtcagaggtcgtggaagagccgaagacagcaaatgcatcctagtgactagtaaaaga
gagcaagctgaaaaagaagagcttaaccattatcaagaaaatataatgaataatgctgtt
aaggagctacaaagattaagtgaggaagagtttgtgaaacagataaatattttacagact
acagagaagatgattcgtgactttaaaaattgtgtaattccaacaaaaccagaaggtggc
aataaaaggttgctctgttcaaaatgcaaagcatttgcatgctacactgatgatatcaga
gttattcaggtatctcatcatgctgtgtttgatgactcatttgccacacgtttcataaca
aagccacacccaaaaccaaaatgttttcaaggttaccagaagaaagccaaaatattatgc
aaggagccaaaatgtcatcatgattggggaataactggaacctatgtgacattgcagaac
attcctctgattaaaattgaaagttttgtagttgaggatattgaaacaggtgaacagaaa
tatttcccaaggtgggtggacgtaaattttaccatgaaggattttgatttggaagagatg
agtaagaaggcacaggctaattctcaatga
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