Microcaecilia unicolor: 115468800 Help Entry 115468800         CDS       T09142                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism muo  Microcaecilia unicolor Pathway muo04010   MAPK signaling pathway muo04120   Ubiquitin mediated proteolysis muo04140   Autophagy - animal muo04144   Endocytosis muo04620   Toll-like receptor signaling pathway muo04621   NOD-like receptor signaling pathway muo04622   RIG-I-like receptor signaling pathway muo05132   Salmonella infection muo05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:muo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     115468800 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     115468800 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     115468800 (TRAF6)    04140 Autophagy - animal     115468800 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     115468800 (TRAF6)    04621 NOD-like receptor signaling pathway     115468800 (TRAF6)    04622 RIG-I-like receptor signaling pathway     115468800 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     115468800 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     115468800 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:muo04131]     115468800 (TRAF6)    04121 Ubiquitin system [BR:muo04121]     115468800 (TRAF6) Enzymes [BR:muo01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      115468800 (TRAF6) Membrane trafficking [BR:muo04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     115468800 (TRAF6) Ubiquitin system [BR:muo04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     115468800 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 TRAF6_Z2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 RING_XB3-XBAT31 TRAF3_RING SlyX Sina_ZnF Med21 zf-RING_11 U-box zf-rbx1 Myosin_tail_1 CENP-F_leu_zip ATG16 CENP-H Cdc13_OB2 Spc29 Noc2 DUF7310 PspA_IM30 TMF_DNA_bd DUF16 DM Motif Other DBs NCBI-GeneID:  115468800 NCBI-ProteinID:  XP_030056662 UniProt:  A0A6P7XMR4 LinkDB All DBs Position 4:complement(156241259..156263223) Genome browser AA seq 556 aa AA seqDB search MSVLHSDNSSGPGDFENACCAAMASAFHGGAKDDSVYGSSTVGPGTLPSSLIEEMQGYDV EFDPPLESKYECPICLMALREAVQTPCGHRFCKGCILKSLRDAGQKCPVDNELLLENQLF PDNFAKREILSLKVKCPSQGCSQKMELRHLEEHEGQCEFACMECPQCQAPFQRRLIEDHM RLECPRRQVSCENCAMFMAYEDKQDHDHTCPLAYVICEYCHTELIREQMPSHYDMDCPKA PIPCTFSDFGCPEKMPRNDLARHMQEFTQAHMRMMAQALRGVSVTSYSTTPVSMIDPLQF EPGPSVMTHSHSSASPFPRDCIPEVQNLRETIQQLEGRLVKQDHQIRELIAKMETQSTTI IDLKRSIRALEEKVTEVEAQQCNGIYYWKIENFGMHLKAQEEERPVVIHSPGFYTRKPGY KLCLRLHLQLPSAQRCANFISLFVHTMQGEYDSYLPWPFQGTIRLSILDQSESPNRQNHE EIMDTKPELLAFQRPTVLRNPKGFGYVTFMPLQTLKQRTYIKDNTLLIRCEVTTRLDMNN LRLESVQPRNTDNSGW NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atgagtgtattacacagtgataacagcagtggccctggtgactttgagaacgcttgctgt gctgccatggccagtgcgttccacggtggggcaaaggatgacagcgtatacggcagtagc actgttgggccaggaaccctccctagctctttaatagaagaaatgcagggttatgatgtg gagttcgaccccccacttgaaagcaagtatgagtgtccgatctgtctcatggctctacgg gaagcagtgcaaacgccatgtgggcatcgcttctgtaaaggttgcatcctcaaatctcta agagatgccgggcagaagtgtcctgtagacaatgagcttctccttgagaatcagctattc ccggacaactttgccaagcgggaaatcctttctctgaaagtgaaatgtcccagtcagggc tgcagtcaaaaaatggagctaagacatcttgaggaacacgaaggacagtgcgaatttgca tgtatggagtgtccacagtgtcaggcacctttccagaggcgtctaattgaagatcacatg cgactcgagtgtccacggaggcaagtctcctgtgaaaactgtgctatgttcatggcttat gaagataagcaggatcatgaccacacctgtccattggcctatgtgatttgcgaatattgc catacggagctcatccgagaacagatgcctagtcactatgacatggattgccccaaggct cctatcccctgtacctttagtgactttggatgtccagaaaagatgccaagaaatgaccta gcacgtcacatgcaagaattcactcaggcacacatgcgaatgatggcacaggccctccga ggcgttagcgtcacatcttattcaaccactcctgtatccatgattgaccctttgcaattt gagccaggaccttctgtcatgacccacagccactcttcagcctcgcccttcccacgtgac tgcatccctgaagtccagaacttacgagagactattcagcagctagagggccgtctagtt aaacaagaccaccagatccgagagctaatagccaaaatggagactcagagcactaccata atagatttgaaacgcagcatccgagcactagaggagaaagtgactgaagtggaagcgcag cagtgcaatgggatttattactggaagattgaaaattttgggatgcatctcaaagctcaa gaagaagagagacctgttgtcattcacagtcctggattttacactagaaaacctgggtac aaactttgcctacgcctccatcttcagttgcctagtgcccaacgctgtgcaaactttata tccctgtttgtgcatactatgcaaggagaatatgacagctacctcccctggccgttccag ggcacgatacgacttagcattctcgatcagtcagagagccccaacaggcaaaatcatgaa gaaataatggacacaaaacctgagcttctagccttccagcgtccaacagtgcttcgcaat ccaaagggatttggatatgtgacgtttatgcccctgcagaccctgaagcaaaggacttat atcaaagacaataccctgctgatccgttgtgaggtgaccacacggctggacatgaacaac cttcgactagaaagcgttcagccacgcaacactgacaatagtggctggtaa

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