Microcaecilia unicolor: 115469049
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Entry
115469049 CDS
T09142
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115469049 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muo03400
]
115469049 (LIG4)
Enzymes [BR:
muo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
115469049 (LIG4)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115469049 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
LIG3_BRCT
Herpes_UL52
Terpene_syn_C_2
TnpV
Motif
Other DBs
NCBI-GeneID:
115469049
NCBI-ProteinID:
XP_030057177
UniProt:
A0A6P7XP87
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All DBs
Position
4:complement(233021316..233031758)
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AA seq
917 aa
AA seq
DB search
MNVKSRIPMSETPALEPVMKTVASQVPFADLCRTLEKIQRSKSRQDKVKHFKDFVDAWRK
YHDALHKENVSTVDSFYPAMRLILPHLERERLAYGIKETMLAKLYIEVLGLPKDGKDALK
LLNYRAPTGSHGGVGDFAMIAYFVLKQRCPKEGTLTIQQVNTILDSVANNNALKKREIVK
KSLLKLIVESTSLEQKWLIRMIIKDMKLGISQQTIFSIFHPDAVELHNVTTDLEKVCRQL
HDLSVSLSDISIMLFSAFKPMLASIVNIQDIEKQMHNQNFYIETKLDGERMQMHKDGDVY
KYFSRNGHDYTQQFGASPLEGSLTPFIHNVFNTNVQNCILDGEMMAYNPNTQTFMQKGSK
FDIKRIMDDSDLQTCYCVFDVLMLNDDKLAREPLKKRYEVLQNLFTPVVGRINIVHKKEA
STKKNVVDALNEAIDNREEGIMVKDPMSTYKPDKRGEGWVKIKPEYVDGLMDEADILIVG
GYWGKGSRGGMMSHFLCAVAETPPPGEKPSTFFSFCRVGSGYTMKELYDLGLKLAPHWKP
YNKQGPPLNVICGPEKPEVYIDPSNSVVIQIKAAEIVPSNMYKTSCTLRFPRIEKIREDK
EWYECMTMKDLNELRERASGKLASKHLNIDDEPHEKKRKIIPKISKAVGVIEHLKAPDFS
TIKKVSNMFQDIEFCVMSGTDDYSKCELENKITECDGIVVQNPGQDTYCVIAGTENVRVR
NIISSNKNDVVTAKWLLQCFETKSIVALQPCHMIHMCPSTKQHFALEYDCYGDSYCSDTD
LVQLRDVFQRMHNNKKIPVDMIADLEQQYSCDNFSFAMFRHCIVFLDIFAIINDPTTKIH
ASVLDIKAFELRLYGATVVKRIEEGVTHVVTGDDHTRVGTIKALRRTFEKKFKIVSEHWV
THSLKAGKRQDENKYLI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttaaaagcagaatcccaatgtctgaaacacctgctctagaaccagtgatgaaa
actgtggcatcacaagtgccatttgcggatctctgtagaacactggagaaaattcaaaga
agcaaatcccgacaagataaagttaagcattttaaagactttgtggatgcatggagaaaa
tatcatgatgcccttcataaagagaacgttagcactgtggactcattttatcctgcaatg
cgacttattcttccacatttggaaagggaaagattagcttatgggattaaggaaaccatg
cttgctaaactttatattgaagtacttggtttaccaaaagatggcaaagatgcattaaaa
cttttaaattatagagctcctactggctcacatggtggtgttggggactttgcaatgatt
gcttattttgtactgaagcaacgatgcccaaaagaaggcactttaaccatacagcaagtg
aatactattttagattcagttgctaacaacaatgctctgaaaaagagagagatcgtgaag
aaaagcctcctcaaattaatagttgagagcacatcccttgagcagaagtggttgattcga
atgattataaaagacatgaagcttggaattagtcaacagactatattttccattttccat
ccagatgccgttgagttacacaatgtcacaacagacctggaaaaagtttgtaggcagttg
catgatctttcagtgtcccttagtgatatatccattatgttattttctgcttttaaacca
atgcttgcttctattgttaatatacaagatattgagaaacaaatgcacaaccaaaatttt
tacatagaaactaaacttgatggtgagcgtatgcagatgcataaagatggagatgtatac
aagtatttttctcgaaatggccatgattatactcagcagtttggcgcatctccccttgag
ggatccttaactccatttattcataatgttttcaacactaatgtgcaaaattgcatcctt
gatggtgaaatgatggcttacaatcccaatacacaaacctttatgcagaagggaagcaaa
tttgacatcaaaaggataatggatgattcagatctacaaacatgctattgtgtgtttgat
gttttaatgcttaatgatgataagttagctcgtgagcccctgaagaaacgatatgaggta
ctccaaaatctgtttacaccagtagttggtagaattaatattgtgcataagaaagaggcc
agtaccaagaaaaatgtagtggatgctctaaatgaagcaattgataatagagaggaagga
atcatggttaaagatcctatgtctacttacaagcctgacaaacgtggagaaggctgggta
aaaattaagccagagtatgtggatggtttgatggatgaagctgatattttaattgttgga
gggtactggggtaaaggatcacggggtggtatgatgtctcatttcctgtgtgctgttgct
gagactcctcctcctggtgaaaaaccgtcaacatttttttctttttgccgtgttggctct
ggctacacaatgaaggaactatatgatcttggtttgaaactggccccacactggaagcct
tacaataaacaaggtccacctttaaatgttatatgtgggcctgagaagcctgaagtatat
attgatccgtctaattcagtggttattcagattaaggcagctgaaattgtgccaagtaat
atgtataaaaccagctgtactttacgcttcccccgtattgaaaagataagagaagacaaa
gagtggtatgagtgtatgactatgaaagatttgaatgaactcagagagagagcttcagga
aagctagcttccaaacacctaaatattgatgatgaacctcatgaaaagaaacgtaaaatc
ataccaaagattagtaaagcagttggtgttattgagcatcttaaagcccccgatttttcc
actataaagaaagtgtctaatatgtttcaagatatagagttttgtgtaatgagtggaact
gatgattattcaaaatgtgagctggagaacaagattactgaatgtgacggcatagtggta
caaaaccctggacaagatacttattgtgttattgcagggactgagaatgtaagagtaaga
aacataatctcttcaaacaaaaacgatgttgtgacagctaagtggctcctgcagtgtttt
gagaccaaaagtattgtggcgttgcagccgtgtcacatgattcacatgtgtccatctact
aagcaacattttgccttagaatatgactgctatggagacagttactgttcagatactgat
ctggttcagctaagggatgtattccagagaatgcataacaataaaaagattcctgtggac
atgattgctgacttggagcaacagtactcttgtgacaacttttcattcgctatgtttcga
cactgcatagtttttttggatatctttgcaattattaatgatcccactaccaaaattcat
gcatcagtactagatattaaagcctttgagctgcggttatatggggccacagtagttaag
cgtatagaagagggagtaactcatgtagttacaggagatgatcatactcgtgtgggaaca
ataaaagctctccggagaacatttgaaaagaaattcaaaattgtgtccgaacactgggta
acccactcattgaaagcaggcaaacggcaggacgaaaacaaatatttaatttaa
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