Microcaecilia unicolor: 115471556
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Entry
115471556 CDS
T09142
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
muo
Microcaecilia unicolor
Pathway
muo00514
Other types of O-glycan biosynthesis
muo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115471556 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115471556 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
muo01003
]
115471556 (RFNG)
Enzymes [BR:
muo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115471556 (RFNG)
Glycosyltransferases [BR:
muo01003
]
Glycan extension
O-Glycan
115471556 (RFNG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
TSSC4
Motif
Other DBs
NCBI-GeneID:
115471556
NCBI-ProteinID:
XP_030061044
UniProt:
A0A6P7YE06
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Position
6:complement(345622971..345681433)
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AA seq
387 aa
AA seq
DB search
MNFSCMGLSKLCFLLSVVFCTLILLLIPQFHTHWKSRHYPLPAFNGKCEKNYTLRQQLSS
EIIAHFGANENPEKWKGYSLDTGTSHLKSESLQTNTSSPLDSMLKNLSMSVSNSEKEILE
LKEIFIAVKTTRKYHKTRLDLLIKTWISRAKQQTYIFTDWEDQELRQLAGDQMINTNCSS
VHTRQALCCKMAVEYDKFIESSKKWFCHVDDDNYVNLSALHHLLAAFSHSQDVYLGRPSL
DHPIEAADRVRSDGSTSVKFWFATGGAGFCISRGLALKMSPWASMGNFISTAEKMRLPDD
CTIGYIIEGLLEVKLLHVSLFHSHLENLQRLRSILKQVTLSYGGPENQHNVVSIGRIFNL
QQDPTRFRSLHCLLYPDTAWCPAGTRL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctcatgcatggggcttagtaagctctgcttcctgctgtcagttgttttctgt
actttgatattgctcctaatccctcaattccacactcattggaagtctcgccactatcca
cttcctgcttttaatggtaaatgtgaaaagaattacacactacgacagcaactctcttct
gaaattattgcacattttggagcaaatgaaaacccagaaaaatggaaaggctatagtctg
gacacagggacatctcatcttaaatctgagagtcttcaaaccaacacatcaagtcctctt
gacagcatgctgaagaacttgtctatgtctgtgagcaattctgagaaggaaatattggaa
ctgaaggaaattttcattgctgtaaaaaccacaaggaagtatcacaaaacacgtttggat
ctgcttatcaaaacctggatctcgagagcaaaacagcagacatatatattcacagattgg
gaggatcaagaactgcgacagttggcaggagatcagatgatcaataccaactgctcttct
gtgcacacccgccaagctctctgttgtaagatggctgtggaatatgacaaattcattgaa
tcttcaaaaaaatggttctgccatgttgatgatgacaactatgtgaacctgagtgccctt
caccacctgctggcagctttttctcacagtcaggatgtgtatttggggcgacctagcttg
gatcaccccattgaagctgcagatcgtgtacgaagtgatggctcgacctcggtgaagttc
tggtttgctactggaggagctgggttttgtatcagtagaggtctggctctgaagatgagt
ccttgggcaagcatgggaaactttataagcactgctgagaagatgcgtctccctgatgac
tgtaccattggttacattatcgaaggtcttctggaggtaaaactgctacacgtatcactt
ttccactcccacttggagaatttgcagagacttcgatctatcctgaaacaggtcactctg
agctatggaggtcctgagaaccagcacaatgttgtgagcattggaagaattttcaatcta
cagcaagatcctacacgcttcagatctctgcattgtcttctctaccctgacactgcttgg
tgccctgcaggaacgaggctttga
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