Microcaecilia unicolor: 115479962
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Entry
115479962 CDS
T09142
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115479962 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
muo03000
]
115479962 (KDM2B)
04121 Ubiquitin system [BR:
muo04121
]
115479962 (KDM2B)
03036 Chromosome and associated proteins [BR:
muo03036
]
115479962 (KDM2B)
Enzymes [BR:
muo01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
115479962 (KDM2B)
Transcription factors [BR:
muo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
115479962 (KDM2B)
Ubiquitin system [BR:
muo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115479962 (KDM2B)
Chromosome and associated proteins [BR:
muo03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
115479962 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
115479962 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Motif
Other DBs
NCBI-GeneID:
115479962
NCBI-ProteinID:
XP_030074165
UniProt:
A0A6P7ZFH5
LinkDB
All DBs
Position
11:complement(36092258..36415130)
Genome browser
AA seq
1265 aa
AA seq
DB search
MEAEKESGRRLRCIGRRRYDENEDLSDVEEIVSIRSFNLDEKLSSGAYNANFVHLMEGKD
FTYEYVQQEALRVPLLFITKDGLGINMPDPDFSVRDVKLLVGSRRIVDVMDVNTQKGIEM
SLSQFVRYYETPEAEREKLYNVISLEFSHTKLEHVVKRPTVIDLVDWVDNMWPQHLKEKQ
TEATNSISEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKVFWLIPPTLHNL
ELYEEWVLSGKQSDIFLGDRADGCQKIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQAKFRYPFYYEMCWYVLERYVHCLTKKSHLIREYQKESMLI
DVTRKPSVDSLSSDSWVDMDEGSCETHTHEEKDDNTEKGLKFPADGCSSPNSTHSEEREA
AGLKPKETGMRYLKRTLSNESNDSMKSTTPIDYPKTPTGSPATELATRWTHLTEFELKGL
KALVEKLESLPENRKCIPEGIEDPQALLEDMKAVLKEHVEDEQNLAISGVPIVAWPKKAI
KNRAVGRPKGKLGTTSAVKLAANRTTAGARRRRTRCRKCEACLRTECGACHFCKDMKKFG
GPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEQDGQKFNIMLMECSICNEIIHP
GCLKIKESDGVVNDKLPNCWECPKCNHAGKSGKVSLEMCTRQPSNQKRGPGFKYASNLPG
SLLKEQKLNRDNKEIRGGERDETPRRKSEEPPKKKPLDSILRRKSDEVYLRRKRKFEKPP
EPAMRKRLKLVKEEKLFRKKRKLWKTPDDRPVLAKMLRRVKQEPEEEMPEAPPKARESDQ
SRASSPTAGPSTEGAEPNEKKKIKRRKRRLPNKELSKELSKELNQEIQKTENSLANENHQ
LIKSEPESENEESKRSLNSSERLHRFSKELNGTPRELRHQLVPSLRSTPRVITRPAPALS
PPKCIQMERHVIRPPPISPPPDSLPLDDGEAHVMQREVWMAVFGYLTHRDLCICMRVCKT
WNRWCCDKRLWTKIDLNRCKSITPLMLSGIIRRQPASLDLSWTNISKKQLSWLINRLPGL
RDLMLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQIDNRSK
FRNIVELRMAGLDITDASLLLMIRHMPLLSKLDLSYCNHVTDQSINLLTAVGTTTRDSLS
EISLSDCNKVTDQCLTYFKRCGNICLIDLRYCKQVTKENCEQFIAEMSVIVQFGQTEEKL
LQKLS
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagaatctggaagaagattgcgctgtattgggagacgaagatacgac
gagaacgaagacctctcggacgttgaggagattgtcagcattcggagctttaatctggac
gagaaactcagcagtggcgcgtataatgccaatttcgtgcacttgatggaagggaaagat
ttcacctatgagtatgtacagcaagaagctcttagggttcctcttctcttcataactaag
gatggactggggattaacatgcccgacccggatttcagtgttagagatgtaaaactgtta
gttggaagccgtagaattgtggatgtgatggatgtcaacacgcagaagggcatagaaatg
agcctgtctcagtttgtgagatactacgagactccagaagctgaaagagaaaagttgtat
aatgttatcagtctcgagttcagtcacaccaaactggagcatgtggtcaagcgtccaacc
gtgattgacctggtcgactgggtggataatatgtggccacagcacttgaaggagaagcaa
acagaagccacaaattccatctcagaaatgaagtaccctaaggtgaaaaagtattgttta
atgagcgtcaaaggctgcttcacagatttccatattgattttggcggcacgtctgtttgg
tatcacgttttccgtggagggaaggtattttggttgattcctcctactctgcacaattta
gaactttatgaagagtgggtgttgtcaggaaagcaaagtgatatatttctgggagataga
gcagatggatgtcaaaagattgaactgaaacaaggttacacgttcttcatcccatcagga
tggatccacgctgtctatacaccagtagattccctcgtgtttggtgggaacattttgcat
agttttaatgttcctatgcagcttcgcatatatgagattgaagacaggacgagggtacaa
gccaaatttcgctatcctttctactatgaaatgtgctggtatgttctggaaagatatgtg
cactgtttgacaaagaaatctcatctcatcagagagtaccagaaagaatcaatgctgatt
gatgtaaccagaaaacccagtgtagacagtctttcctctgattcctgggtagacatggat
gaaggatcctgtgaaacgcacactcatgaggagaaggatgacaacacggaaaaaggccta
aaattcccagcagatggttgctcgtcacctaatagcacacactccgaagagagggaggca
gcagggctaaaaccaaaagaaactggaatgaggtatctcaaaaggactttgtccaatgag
tcgaatgacagtatgaagtccacaaccccaatagactatcccaaaacaccaacaggctcc
ccagcaacagagctggctaccaggtggactcatctcacagagtttgaattgaaggggctg
aaagcactagtagaaaaacttgaatcgcttcccgagaatagaaaatgcattccagaaggt
attgaggatcctcaggctctcctggaagatatgaaggctgtcctgaaagagcatgttgag
gatgaacagaatctggcaatttccggggtccccattgtagcctggcctaaaaaggctatt
aagaatagggctgtgggaaggccaaaagggaaacttggaaccacctctgctgtgaaattg
gctgcaaaccgtacgaccgctggggcccgcaggcgaagaacccgatgccgaaagtgcgaa
gcttgccttcgtacagaatgtggggcgtgccatttctgcaaagacatgaaaaaatttggg
ggtcctggaaggatgaagcagtcctgcattatgcgacagtgcattgctccggtgctgcct
cacactgctgtctgcctggtttgcggagaagctgggaaggaggacacagtggagcaagat
gggcaaaagtttaacattatgttaatggaatgttccatttgtaatgaaataatacacccg
ggatgccttaagataaaggagtcagatggtgtggtcaatgacaaacttccaaattgctgg
gaatgtcccaagtgcaaccatgcaggaaaatccgggaaagtgagtttagaaatgtgtaca
cggcagccttcaaatcaaaaaagaggaccgggattcaagtacgcatccaacctcccgggc
tctctactgaaggagcagaagctgaaccgagacaacaaagagataagaggaggggagcgg
gatgagacccccaggcgcaagtcagaagagccccccaagaagaagcccctggattcgatt
ttgaggagaaaatctgacgaggtatatctacgaaggaagaggaaattcgagaagccacca
gagccagctatgaggaaacggctaaaacttgttaaagaagaaaagctcttcaggaaaaag
aggaaattgtggaaaactccagatgaccgtccggtccttgccaaaatgttgcgacgtgtg
aaacaagaaccggaggaagaaatgcctgaagcaccgcccaaagcgagagagagtgaccag
tcaagagccagctctccaacagcgggccctagcactgaaggagcagagccgaatgagaaa
aaaaagatcaagaggcggaaacgaaggctccccaacaaagaactgagtaaggagctgagc
aaagagctgaatcaggaaattcaaaaaaccgagaatagccttgcgaacgaaaaccaccag
ctcatcaaatctgagccagagagtgaaaatgaggaatccaaacggtccttgaacagtagc
gagagactgcataggtttagcaaagaactgaatggaacaccaagggagcttaggcaccaa
cttgtccctagtctccggagcaccccaagagtgataacacgtccagccccagccttatcg
cctcccaagtgtattcagatggagcgccatgtaatcagacctccacctatcagtccacct
ccagattctttacctttggatgatggtgaagctcacgtcatgcaaagggaggtgtggatg
gctgtatttggctacctcactcacagagacttgtgcatctgtatgagagtctgcaaaact
tggaacagatggtgctgcgataaacgattgtggaccaaaatagatttaaaccgctgtaaa
tccatcacaccacttatgcttagcggcattattagaagacagcctgcatccctggacctc
agctggacaaacatatccaaaaaacagctgagttggcttatcaacagacttccaggtctt
cgagacctgatgctctcaggatgctcctggattgctgtttctgcattatgtagctccagt
tgtcctttactcagaactctcgacgtccagtgggtggaaggactgaaagatgcacagatg
agagaccttttatccccaccaacagacaacagaccaggtcagattgacaaccgcagtaaa
ttccgcaacattgtggagctgcgtatggctggcctggatatcacggatgcttcactgcta
ctgatgatccgccacatgccactactctccaagctcgacctcagctactgtaaccacgtg
acagatcagtctatcaacttgctcactgcagtgggaaccaccacacgagattccttatcc
gagatcagcttatcggattgcaataaagttactgaccagtgcctgacctactttaaacgc
tgtggaaatatctgtttaattgacttgaggtactgcaagcaggtaacaaaggaaaactgt
gagcaatttatagcagagatgtctgtgattgtacagtttggacaaacagaagaaaaactc
ttgcagaagttgagctga
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integrated database retrieval system
