Microcaecilia unicolor: 115481426
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Entry
115481426 CDS
T09142
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
muo
Microcaecilia unicolor
Pathway
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115481426 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
muo03041
]
115481426 (EFTUD2)
Spliceosome [BR:
muo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115481426 (EFTUD2)
Complex C
U5 SnRNP specific factors
115481426 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
115481426
NCBI-ProteinID:
XP_030076387
UniProt:
A0A6P7ZAN5
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All DBs
Position
12:80417901..80518431
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AA seq
974 aa
AA seq
DB search
MDTDLYDEFGNYVGPELDSDDDDDEMGRGDKDGDEMDDDEDDDDDYMGDHDDDHRGMDVV
LHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQGLPATVYEMDF
LADLMDNPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRHDQDLCYTDILFTEQERG
VGIKSTPVTVVLPDTKDKSYLFNIMDTPGHVNFSDEVTAGFRLSDGIVLFIDAAEGVMLN
TERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLLSMYSTDENL
VLSPLLGNVCFASSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTK
KAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPQTLDELGIHLTKEELKLNIRPLLRL
VCNKFFGDFTGFVDMCVQHICAPKSGAKAKIEHTYAGGIDSDLGETMSECDPDGPLMCHT
TKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTIGRLWISVARYH
IEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPS
ELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADP
VVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFF
QTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLSSVKDSIVQGFQWGTREGP
LCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQA
PADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSL
SVFHHWQIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPML
LELAKQDVVLNYPM
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggacacagatctgtatgatgaatttggcaattacgttggaccagaactggattctgat
gatgatgatgatgaaatggggagaggcgacaaagatggtgatgagatggatgatgatgaa
gatgatgacgatgactatatgggagaccatgatgatgatcaccgtggtatggatgtggta
ttgcacgaggacaagaagtattaccctacagcagaagaggtttacgggcctgaagtagag
accatcgtacaagaagaggacacacaacctctaactgaacctattattaaacctgtgaag
accaagaagttctccttgatggagcagggcttgcctgccacagtgtatgagatggatttt
ttggctgatctgatggacaacccagagctgatcagaaacgtaactctatgtggacatctc
caccatggcaagacctgctttgtggattgtctgatagaacagacccatccagagatcagg
aagcggcatgaccaggatctctgctacacagacatactttttactgaacaggagagggga
gttgggatcaagagtacgccagtgactgtagtcctacctgataccaaggacaaatcctac
ctcttcaatatcatggacaccccaggtcatgtcaatttttctgacgaggttactgctggc
ttccgcctttcagatggcattgtactttttattgatgcagctgagggggtaatgctgaac
acagagaggctaatcaagcatgctgtgcaggagaggctggcagtgactgtgtgcattaat
aaaattgacagactaatcctggagctgaagttgccccccactgacgcctattacaaactc
cggcatattgtggatgaggtcaatggattgctgagcatgtattccactgatgaaaacctg
gtgctttcccctctactgggaaatgtttgctttgccagttctcaatatagcatctgcttc
acactgggttcctttgccaaaatttatgcagacacctatggggacatcaattatcaagaa
tttgctaaacgcctctggggagacatctacttcaacccaaaaacacggaagttcacaaag
aaggcccccaccagcagctcccagcgcagttttgtggaatttatcctggagcccctttat
aagattctggctcaggtggtaggcgatgtggacaccacactccctcagactctggatgag
ctgggaatccacctgaccaaagaggaactgaaactgaacatccggcccctactgcgtctt
gtgtgcaataaattctttggagacttcacaggctttgtggatatgtgtgtacagcatatc
tgcgctccaaaatctggagccaaggcaaaaatcgagcacacctatgctggcggcattgat
tctgacctaggagagaccatgagtgaatgtgaccctgatggtcctctgatgtgccacaca
acgaagatgtacagcacagatgacggtgttcaatttcacgcctttggcagggttctgagt
gggacaatccatgctgggcagcctgtgaaggttctgggggaaaactatacattggaagat
gaggaggattctcagatctgcaccattgggcgactctggatctctgtggcaagatatcat
attgaagtgaaccgtgtgccagctggaaactgggttctgattgaaggagttgaccagccc
attgtgaaaacggcaactatcactgaacccagaggcaatgaggaggctcaaatctttcga
ccactaaagttcaacaccacttcagtcatcaaaattgctgtggagcccgtcaatccatca
gagctgccaaaaatgctagatgggctgagaaaagtgaataaaagctacccctctctcacc
actaaggtggaagaatctggagagcatgttattttgggtacaggtgagctgtatctggat
tgtgtgatgcacgatttgcggaagatgtactctgaaattgatatcaaggttgccgatcct
gttgttacattctgtgagacagttgtggaaacttcatctctgaagtgctttgctgagact
ccaaataaaaaaaacaagattacaatgattgctgagccgctggagaaaggcctggcagaa
gacattgagaacgaagtggtgcagattacctggaacaggaagaagttgggggagttcttc
caaaccaagtatgactgggatttactggcagctcgttctatttgggcctttggaccagat
gctactggtcccaatattctggtggatgacaccctaccatcagaggttgataaagcattg
ttgagctccgtgaaagacagtattgttcagggcttccagtgggggaccagggagggcccc
ctctgtgatgagttgatacgcaatgtgaaatttaagatcctggatgcagtgattgcacag
gaaccattacaccgaggtgggggtcaaatcatcccaactgcccgacgagttgtctactct
gccttcctcatggccaccccacgcctgatggagccttactattttgtggaggtgcaggcc
cctgctgattgcgtctctgctgtctacactgtgttggccagaagaaggggtcacgtgact
caggatgcaccaattccaggctccccactctataccattaaagccttcatcccagccatt
gactcttttgggttcgagactgacctgagaacccacacacaggggcaggccttttctttg
tctgttttccaccactggcagattgtgcctggtgaccccctggataagagcatcattatc
cgacctctggagccacaaccagcacctcacctggccagagaattcatgataaagaccagg
cgcagaaagggtctgagtgaagatgtgagcatcagcaagtttttcgacgatcctatgttg
ctggaattggccaaacaggatgtggtcttgaactatcccatgtga
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