Muriicola soli: EQY75_07465
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Entry
EQY75_07465 CDS
T05825
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mur
Muriicola soli
Pathway
mur03030
DNA replication
mur03410
Base excision repair
mur03420
Nucleotide excision repair
mur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EQY75_07465 (ligA)
03410 Base excision repair
EQY75_07465 (ligA)
03420 Nucleotide excision repair
EQY75_07465 (ligA)
03430 Mismatch repair
EQY75_07465 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mur03032
]
EQY75_07465 (ligA)
03400 DNA repair and recombination proteins [BR:
mur03400
]
EQY75_07465 (ligA)
Enzymes [BR:
mur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EQY75_07465 (ligA)
DNA replication proteins [BR:
mur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EQY75_07465 (ligA)
DNA repair and recombination proteins [BR:
mur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EQY75_07465 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EQY75_07465 (ligA)
MMR (mismatch excision repair)
DNA ligase
EQY75_07465 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EQY75_07465 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
Nlig-Ia
HNOB
HHH
Motif
Other DBs
NCBI-ProteinID:
QBA64379
UniProt:
A0A411E9L9
LinkDB
All DBs
Position
complement(1652298..1654295)
Genome browser
AA seq
665 aa
AA seq
DB search
MTPEERIHALRKELHDHNYRYYVLDAPVISDYEFDLKLKELQALEDANPQFKDASSPTMR
VGGAVTKNFNTLEHEQRMYSLDNSYSREELLEWEKRVNKILGGAKVEYTCELKYDGASIS
LTYENGTLSRALTRGDGFQGDEVTANVKTIKSVPLKLRGDYPEKFDIRGEIILPLEGFEK
MNKERIKNGDDPYMNPRNTASGSLKLQDSALVAERPLDCLLYALVGRNLPAANHYELLDK
ARKWGFKIPKEAKLCKTMDEVLTYLDHWDTHRHDLPYETDGVVIKVNNLIQQEELGYTAK
SPRWAIAYKFQTEQSSSVLEKITYQVGRTGAITPVANLQPVLLAGTTVKRASLHNADQIA
KLDIREGDTVFVEKGGEIIPKIVGVDLSRRPEDSSPTKYITNCPECDTLLQRQAGEAQHF
CPNITGCPPQITGRIQHFISRKAMDIEGLGAETVELLFNEGLIENYADLYTLTKEQVVPL
ERMADKSAENLIQGIADSVNIPFERVLFALGIRYVGETVAKVLAKAFKDIDALMEASQES
LMQVNEIGQRIAESVVSFFEEEKNREIIEELRKHGLKFSLSEAQLENQTDLLKGKTLVVS
GVFENLERNELKKLIEDNGGKVSSSISSKTSYLVAGNNMGPSKRTKAETLGVPIISEEEF
LDLIK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgactccggaagagcgaattcatgccctgagaaaggaacttcacgaccataattaccgc
tattatgtactagatgcccccgtaatatctgattatgaatttgatcttaaactaaaggaa
ttacaggctctggaagatgcaaacccccaatttaaagatgcgagttcgcctaccatgagg
gtagggggagcggtgaccaaaaattttaataccctggagcatgaacagcggatgtattct
ttggataattcctattccagggaagaattgttagaatgggagaagcgtgtaaacaaaata
ctgggcggcgcaaaagttgaatatacctgcgagttgaaatacgacggggcttccatcagt
ctgacttacgaaaatggaaccttatccagggcgcttacccggggggatggttttcaggga
gatgaggttacggccaatgtcaaaactataaaatctgtccctttaaaattgagaggtgat
tatcctgagaaatttgatatccggggtgagattatccttcctctcgaaggatttgagaaa
atgaacaaagagcgtattaagaatggtgatgatccctatatgaaccccagaaatacggcc
tcaggaagtttaaaattgcaggatagtgcccttgtggcagaaagacctcttgattgcctg
ttatacgccttggttggtaggaatcttcctgcggccaatcactatgaactcctcgataag
gccaggaaatggggttttaagattcctaaagaggcaaagctatgcaaaactatggatgaa
gttttgacttatctggaccattgggatactcatcgacatgatcttccatatgaaaccgac
ggggtggttatcaaagtgaacaatctgattcagcaggaggaactgggctatacggctaaa
tcgccgaggtgggctattgcttacaaatttcagacggaacagtctagttctgtcctggag
aaaattacttatcaggtaggcaggacaggggcaattactccggtagccaatttacagcct
gtgctattggcagggacaaccgtaaagcgtgcctcccttcacaatgcagatcagatagcg
aaactcgacattagagaaggggatacagtctttgtggaaaaaggaggggaaatcatccct
aagattgtgggtgttgatttatccaggaggcccgaagattcgagccccaccaaatacatt
acgaattgcccggaatgtgataccctccttcagcgacaggcaggggaagctcagcatttc
tgtcccaatatcaccgggtgtccgcctcagatcaccggtaggatacagcattttatttcg
aggaaggccatggatatagaaggcttgggtgcagaaacggtcgagttgctttttaatgaa
gggcttattgaaaattatgcggatttgtacaccttaaccaaggagcaggtagttcctttg
gagcggatggccgacaagtcggctgaaaacctcatccagggaattgcagattctgtaaat
ataccttttgagcgggtgctttttgcccttggaatacgatacgtaggtgaaaccgtggct
aaggtcctggccaaggcatttaaagacattgacgccctgatggaagcgagtcaggaatcc
ctgatgcaggtaaacgaaataggacaacggatcgcagaaagtgttgtttccttttttgag
gaagaaaaaaatagagaaattatagaagaactcagaaaacacggcttaaaattttcactt
tcggaggctcagttggagaatcaaaccgacttgctgaaggggaaaactttggtggtttcc
ggtgtttttgaaaacctggagcgcaacgaattaaaaaaactgatagaagataacggcggc
aaggtgagctcttctatttcttccaaaacgtcttacctcgtagccggaaacaatatgggt
cccagtaaacgcactaaggctgaaactttgggagtgcccataatttcggaagaggaattt
ctcgatctaataaaataa
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