Musa acuminata (dessert banana): 103968942
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Entry
103968942 CDS
T03447
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
103968942
03400 DNA repair and recombination proteins [BR:
mus03400
]
103968942
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103968942
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
103968942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103968942
NCBI-ProteinID:
XP_064985726
LinkDB
All DBs
Position
BXJ2-10:complement(32116202..32156315)
Genome browser
AA seq
1584 aa
AA seq
DB search
MANRRSSKRSYLEFLDGNDDGDSKVYRFQILLPNGASVRLIFNDPGEDMFLDEFIHIIRK
ELEKTAETTTKASRKIFWNGNIYLEDMSDNKIRKKISFSHFRTNKCHILRLHDEGGESLD
TYHNMWDLTPHTDLLAELPAEYTFETALADLLDNSLQAVWSNGSGERRLVRVTVDEQKIE
IFDSGQGMDGSEENCITKWGKMGSSKHRACRSKAIGTKAPYLMPFFGMFGYGGPIATMHL
GRHATVSSKTKGSRKVYSLYFSREALLNQSTPKCIWRTDGGVREPLDEETQTSPHGSFAQ
VVIRDLKLRCLDIYKLQCFLKDIYFPYIQCDTEYTSRKTAMPIEFEVNDINLAEIQGGDV
TITNLLSCNGPDFIMQLRFMIKSENPGSLGFQEANAQLKCVYFPIVEGKENIERILEKLV
QDGYEIKENFDTFSRVSIRRLGRLLPDSRWNTLPFMETKQRRGDKAHLLKRCCKRVKCFV
ETDAGFSPTPSKTDLAHHHPFTHALRNFGNILCGKESEVTIEILKDGKHSSILQLEKEYR
DWVIQMHDRYDEEINCGEDEPVHIIGPQNKKQLGITADVVRVHQAIKRRGIIWESGQKVK
IFKGATGCLKKNLYATLEYILIEGFQGDVGGDARLICRPLDCSDEKGCSILVDNGNASLD
MHDSLSFPISLIDSENIQAIDLATWNCQVEKHKGRLPSRIDILVGQQCSLLGISGELPME
APVVAGFTPPREIVAVIRPANFSSSMASKGLDQKNIMKNEFEMTLKISHKCRAKQNEQMT
LAHTKSVKPSSHTGISGLYIFGLQDICSKLFYKAGIYIFTFFVNCKNTNIKHLEARVVVK
PDTKVCKWRFVFDEWGPFTDKQLLSTRVGSYISYLSVVCLDRYSNQIPFSSIPEATIKIF
VEECMLLHVGKMKMILSSDQLLLELKDILIESSKLDLIQPSYEAVLAICSQDGLFSAEIP
CKVMPGTLSSVRLQTSLQEGEYLVPEEVIEELVLEMFDAYGNHIEEGVEVFIHTDGFSFQ
DHLGYIRKVNCKGCIDLSGLLTVSANFGSYAHLSVSYDKEIVYKKKFQVAQRELRAVSGV
SGIHPIGCQLENVIFEVFDPDGQVDEKIHGQYHTLRIVSDSLKLDDTIQYTFHHGRCTVP
FVPVPRRPGPFCFSAFHTRYHDLCTDIEVNVLEASKLELFAATESYGTFQSQVLDHMDSS
KCLSHQKDLLVKYISHHTQILDEKITEVGLKIGEHERKLKTLNDQKIQVEQDIHDLRVFI
GPQYLSQIESLSSSREEILKRIERKGDTAAAICCCLSKAIQKQEPWKCFTNCTQDVVGLV
ALLGNVNTSKNSRMFSQFLGEDNMLAIVCKSYEAASRLEYYDEAGKIDHQQAVHGAAATL
GINISRRFPVICLEDIRPYQGRIRPNDPQRRLCLSNPLLQSGAVPAGFLGYAVNMINLDI
HHCNTKTLSGHGLRETLFYLLFGETQVYQTRADMRQARSCIKQGAISLDGGIVRASGFIL
LGDCEPDVMFPVIGTQAHRAFSQDMVMNIKQMEEKKGLLTAIQQEIVKEYEAYTEDMAKF
KKRSDRLRELLTESSSTTNLLEWK
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgaaggtcatctaaaagatcatatttagaattcttagatggaaatgatgat
ggtgattctaaagtatacagatttcaaattctcctgccgaatggtgcaagtgtacggctt
atatttaatgatccaggggaagatatgttcttggatgagtttatacacatcatcagaaag
gaacttgaaaaaactgcagaaacaacaacaaaagctagtcgaaagattttctggaatgga
aacatctatctggaggatatgtctgacaacaagattagaaagaaaatctcttttagccat
tttcgcactaacaaatgtcacatactaaggcttcatgacgagggaggtgaatctcttgat
acttaccataacatgtgggatctgacaccacatactgatcttctagcagaacttccagca
gaatatacctttgaaactgctctagctgacttgcttgataattctttgcaagctgtatgg
tctaatggctctggtgaaaggaggctagttagagtgacagttgatgagcaaaaaatcgaa
atttttgatagtggccaggggatggatggtagtgaggagaactgtatcacaaagtgggga
aagatgggttcttctaagcatagggcttgtagaagcaaggccattggtactaaagctcca
tatttaatgcctttctttggcatgtttggttatggtgggccaattgccactatgcatttg
ggaaggcatgctactgtgtcatcaaaaactaaaggttcaaggaaggtgtattctctatat
ttttcaagagaggctttgttaaaccaatcaacaccgaaatgtatctggcggactgatgga
ggtgtgagggaacctttagatgaggaaactcaaacatcacctcatgggagtttcgcccag
gtggtgattagggatcttaaactaaggtgcttggacatatataaacttcagtgcttcttg
aaagatatttattttccatatatacagtgtgatacagagtacacttcacgaaaaacagct
atgccaattgagttcgaggtgaatgacattaaccttgctgaaattcaaggaggagacgtg
acaattactaatttactctcttgtaatggtcctgatttcatcatgcaactaaggttcatg
attaaatcagaaaatccaggatcattaggttttcaagaagccaatgcacaattgaagtgt
gtttactttcctattgttgaggggaaagagaacattgagcgaattcttgagaagcttgtt
caagatggttacgaaattaaagaaaatttcgacaccttttctcgtgtatcaatacgtagg
cttggtcgtctccttccagattccagatggaatactcttcctttcatggaaactaaacaa
agaaggggagataaagctcatttattaaagagatgctgcaaaagggtgaaatgctttgtt
gagacagatgctggtttttctcctactccttctaagactgatttggcacatcatcaccct
tttactcatgcattgaggaactttggcaacattctttgtggaaaagaatcagaggtaacc
attgagatactcaaagatggaaaacactccagtattttacaattagagaaggaatatcga
gattgggtaattcagatgcatgatagatatgatgaagaaatcaattgtggtgaggatgaa
cctgtacatattattggccctcaaaacaagaaacaacttggtataactgctgatgttgtg
agagtgcaccaagctataaagagaagaggcataatatgggagtcaggacaaaaggttaaa
atttttaaaggtgcaactggatgtttgaaaaagaatttgtatgcaactctagaatacatt
ttaatagaaggatttcaaggtgatgtcggtggtgatgcacgactaatttgcaggccactg
gattgttctgatgaaaaaggctgctcgattttggtggataatggaaatgcaagcttggat
atgcatgattctctatcttttccaataagtctaattgattctgaaaatattcaagcaatt
gaccttgcgacatggaattgccaagttgagaagcataaagggagacttccttccagaatc
gacatactagttggtcaacagtgtagcctgttagggatcagtggggaactacctatggaa
gctcctgtggttgctggttttactcctcctagagaaattgttgctgttattagacctgca
aattttagctcttcgatggcctccaaaggcctagatcagaagaatatcatgaagaatgag
tttgagatgaccttgaaaattagtcataaatgtagagctaagcagaatgaacagatgaca
cttgcccatacaaaaagtgttaaaccttcatcacatactggcatcagtggattatatata
tttgggttgcaagatatatgttcgaaactattttataaagccggaatttatatattcacc
ttctttgttaattgtaaaaataccaatatcaaacacctagaagcacgagtagttgtgaag
cctgacacaaaggtttgcaagtggcgatttgtgtttgatgaatggggccctttcactgat
aagcaactactttctactagggttggttcctatatttcgtatctttctgttgtgtgtctt
gatcggtactcaaatcaaattccattttcaagtatacctgaagctacgataaaaatattt
gtggaagaatgtatgcttctccatgttggcaaaatgaaaatgatcctttcatctgatcag
ttattgttggaattaaaggatatattgattgaaagcagcaagctggacctgattcagcca
agttatgaagctgtgttggcgatatgttcgcaagatggtcttttctctgctgaaattcca
tgtaaagtcatgccgggtaccttatcttccgtgaggctgcaaacttctctccaggaagga
gaatacttggttccagaagaagtgattgaagaacttgtattagagatgtttgatgcttat
ggtaatcatattgaagaaggcgtggaagtgttcatccacactgatgggttttcctttcaa
gaccacttaggttatattcgaaaggtgaactgcaaaggatgtatcgatcttagtggcctt
ctaactgtgtcagctaattttggttcatatgcccacctttcagtttcgtatgataaggag
attgtttataagaagaagttccaagttgcacaaagggagttgagagctgtgtctggggtc
tccggcattcatccgataggttgtcaattggagaatgttatatttgaagtttttgatcct
gatggacaagtagatgaaaaaatacatggtcaatatcacacacttagaatagtatcagat
tcattgaaattggatgatacaattcagtacactttccatcatggccggtgcactgtgcct
tttgtcccagttccccgcagaccagggcctttttgcttttcggcttttcatacacgttac
catgatctttgcactgatattgaggtcaatgttttggaggcttcaaagttggagctattt
gctgcaacagaatcatatggaacatttcaatctcaggttttagatcatatggactcatca
aagtgtctctctcatcagaaggacctcctagtgaagtacatttctcatcatactcagatt
cttgatgaaaaaattactgaagttggattgaagattggagagcatgagaggaaactaaag
acactgaatgatcagaagatacaggttgagcaagatattcatgatctgcgagtgttcatt
ggacctcaatatttgagccaaattgagtctttgagttcttcaagagaggaaatccttaaa
cgaatagaacgaaaaggtgatactgccgctgctatttgctgctgtctttctaaagctatc
cagaagcaagaaccttggaagtgctttacaaactgtacgcaagatgttgttggccttgtt
gctcttcttggaaatgttaatactagcaaaaatagcaggatgttttcacagtttttgggt
gaagataatatgcttgcaattgtttgcaaatcttatgaagctgcaagtagattggagtat
tatgatgaggctggaaagattgatcaccagcaagctgttcatggagctgcagctacactc
ggcattaacataagtaggagatttcctgtaatatgcctcgaagacataagaccataccaa
ggtcgaatcaggcctaatgatcctcagaggagactatgtttgtcaaatccattgttgcaa
tctggggcagttcctgctggatttttagggtatgcagtgaacatgatcaacttagatatt
catcactgcaatacaaaaacactttcaggtcatggccttcgggaaaccttgttctatctg
ctgtttggtgaaactcaagtatatcagactagggcggacatgagacaagctaggtcctgt
attaagcaaggagctatttctctggatggtgggattgtgagggccagcggatttatttta
cttggagactgtgaaccagatgtaatgtttcctgtcattggaacgcaagcacatagagca
ttttcacaggatatggtaatgaatataaagcaaatggaggagaagaagggtcttctgaca
gcaatccaacaagaaatagtaaaagaatatgaagcctacacagaggacatggccaagttt
aaaaaaagaagtgataggttacgtgagttattgacagaaagttcttcaacaacaaattta
ctggagtggaaatga
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integrated database retrieval system
