Musa acuminata (dessert banana): 135584156
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Entry
135584156 CDS
T03447
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04075
Plant hormone signal transduction
mus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
135584156
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
135584156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mus03000
]
135584156
Transcription factors [BR:
mus03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
135584156
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
135584156
NCBI-ProteinID:
XP_064965383
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Position
BXJ2-5:38605852..38609757
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AA seq
606 aa
AA seq
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MPLSEFYQASARKKFDSAQSNKMASRSSNRSSSMPDNEFVELLWENGPVVMQGKSNRPRK
TSIATTNFSLPADRAEGKDSTAIANMPKLGVLEAMDPFVSNFSPSDPSGNAGIISTQFDN
MVPWINYPIEEDPASSNYCSEFFSEISGISMPANENNSFGHSTPYVEHGIVSKALEAGTC
QSSLPSIMSRIENSPKKDVSSMDLMNSSLFLRPGMKGKANLQSVENSATATASSNRIEST
VIQSCSGLQSTSGIQGELNSVSSMLEMGSSAETPREIASVEPLEDVCEQDMPRKNLKSVI
EKDHEAIAASSSVGSGNTAGTASGDPAQGAKRKNQGEECRNHKEDLEDASTPSRKPDADA
AKGRNAKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCSKVDKASMLDEAIEYLKTLQ
LQVQMMSMGSGLCMSPMMLPGGMQHLRVPPIAHFAQMGMNMTFGYGMGMLNMNGSPGCSL
VAAPPPMPGTQFPCSPLQAPQGLYGMPRPTNLPMFAQGQALPVPVPRVPSPFKSMSGLPA
NLNSVPEASTTTTSNPSRAPDAETSSSFKDQKASASDSQGTKGSSQQCLSTPSISDDEPA
ELVNGT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttccgagttctatcaagcatcagcaaggaagaagtttgactctgcccagtcc
aacaagatggccagccgctcgtctaatcgctcttcttccatgcctgataacgagttcgtc
gaactactctgggagaacggtccggttgtgatgcagggcaagtccaacaggcctcggaag
acctccattgccaccaccaacttctctttgcctgcagacagagctgaagggaaggacagc
acagctatcgccaacatgcccaagctgggtgtgcttgaggccatggacccattcgtcagc
aacttctctccctctgatccttctggcaatgccggaatcatcagtactcaattcgacaat
atggttccctggatcaattatccgattgaagaggatcctgcctccagcaattattgctca
gagttcttctctgaaatctcagggatttctatgcctgctaatgagaacaatagttttggt
catagtacaccatatgtggagcatggaattgtttctaaagcactcgaagctggaacgtgt
cagagttcacttccaagcatcatgtcaagaattgagaattcaccgaaaaaagatgtaagc
agtatggatttaatgaactcctcccttttcttgagaccgggcatgaaaggaaaagctaat
ctccagagtgttgagaattctgccactgccactgcaagcagcaaccggatcgaatcgaca
gtaatccagtcttgtagtggtttgcaaagtacttcaggtattcaaggagagttgaactct
gtctcatccatgttggagatgggatcatccgcagaaactccccgagagattgcatctgtt
gagccactggaggatgtctgtgaacaggacatgccaaggaagaatctcaagtcggtaatc
gaaaaagatcacgaagccattgctgcatcttcttctgttggttcaggcaacacagcaggg
acagcatccggcgatccagcacaaggtgcaaagaggaagaatcaaggagaagagtgtcgt
aaccacaaagaagatcttgaagatgcatccacgccatcaagaaagcccgatgctgatgct
gccaagggaagaaatgcaaagagaagccgtgcagcagaggtgcataatttgtcagaaaga
aggagaagggataggatcaatgagaaaatgcgtgcgctgcaagagcttatacccaattgt
agtaaggtggataaagcgtcaatgcttgatgaggccatcgagtatctcaagacccttcag
cttcaagttcagatgatgtctatgggtagtgggctgtgcatgtctccgatgatgctacca
ggtgggatgcagcatctgcgtgttccccccatcgctcatttcgcgcagatgggaatgaac
atgacgtttggttatgggatggggatgctcaacatgaatggttctccgggctgctctcta
gttgcagctcctcctcccatgcctggcacacagttcccttgttctccccttcaagcacct
cagggtttatatgggatgcctcggcctacgaatcttcccatgtttgcacaaggacaagca
cttcctgtgccagtgcctcgtgtgccatcaccattcaaatccatgtcaggcctccctgca
aatttgaactcagtgcctgaagcttcgacgaccacaacaagcaatccttcacgagctcca
gatgcagaaacctcatcaagctttaaagatcaaaaggctagcgctagtgattcacaggga
acaaaaggatcgtcccaacaatgtctgagtacaccgagcattagtgatgatgaaccagca
gaactagtgaacggaacatga
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