Musa acuminata (dessert banana): 135605239
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Entry
135605239 CDS
T03447
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135605239
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mus01007
]
135605239
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mus03016
]
135605239
Enzymes [BR:
mus01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
135605239
Amino acid related enzymes [BR:
mus01007
]
Aminoacyl-tRNA synthetase
Class I (U)
135605239
Transfer RNA biogenesis [BR:
mus03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
135605239
Prokaryotic type
Other AARSs
135605239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
135605239
NCBI-ProteinID:
XP_064951172
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All DBs
Position
BXJ2-2:19699429..19722523
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AA seq
1198 aa
AA seq
DB search
MEDVCEGKEFSFPQQEESILRFWSSIRAFETQLKRTELMPEYIFYDGPPFATGLPHYGHI
LAGTIKDVVTRYQSMNGHHVTRRFGWDCHGLPVEFEIDTKLGIRTRDDVLAMGIANYNEE
CRAIVTRYVNEWEEVITRTGRWIDFKNDYKTMDLKFMESVWWVFAQLWKKELVYRGFKVM
PYSTGCKTPLSNFEAGLNYKDVSDPAIMVSFPIVGDPHNAALVAWTTTPWTLPSNLALCV
NADFVYVKVREKSSGATYVVAESRLSQLPSKKSKSESGGAVVPAQDASLPNSKSKGTTNS
KAKSGVDAGSYQLMEKITGASLVGLRYVPLFDYFMNCSETAFRVVSDNYVTDDSGTGVVH
CAPAFGEDDYRVCVASGIMKDVDLFVPVDADGCFTKEITDFCGRYVKDADKDIINAVKVK
GRLVSNGSIMHSYPFCWRSETPLLYRAVPSWFVAVEKIKLQLLESNKQTYWVPEYVKEKR
FHNWLENARDWAVSRSRFWGTPLPVWTSEDGKEKRVIGSIEELETLSGAKVTDLHRHNID
HITIPSEHGSEFGVLRRVDDVFDCWFESGSMPYAYIHYPFENVEVFEKNFPGHFVAEGLD
QTRGWFYTLMVLSTALFEKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPTEVINDYGADA
LRLYLINSPVVRAEPLRFKKDGVYGVVKDVFLPWYNAYRFLVQNAKRLEVEGFAPFVPID
CETLQNSSNVLDQWINSATESLVHFVRQEMDSYRLYTVVPYLLKFIDNLTNIYVRFNRKR
LKGRTGEEDCRTSLSTLYNVLLTTCKVMSPFTPFFTEVLYQNLRKVSVGSEESIHYCSFP
SATGKREERIERSVMRMMTVIDLARNIRERHSKPLKTPLKEMIVVHPDSDFLEDITGKLR
EYVLEELNIKSVVPCNDPLRYASLRAEPDFSILGKRLGKAMGAVAKEVKSMSQADILLFE
QTGEATFSGHCLKQNDIKVLREFKRPADVTEKEIDAAGDGDVLVILDLRADESLFDAGVA
REVVNRIQKLRKKAGLEPTDIVELYYESLEKDEKILEKIVNSQGEYIKDALGSPLLHKSW
APSEAYRYLQVIFCQEEFQVQFSHEEIPSLSFIIIIAKPALVFNAEAIVALYSGNNKYAE
NLQTYLSSRDLYNLKSEFQAGNGKIKVDCIENQPSVDLEQGKHLFLSVADFYLSRKTG
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtgtgcgagggcaaggaattctccttcccccagcaggaggagtccatcctc
cgattctggtcctccatccgcgccttcgagacccagctcaagcgcaccgaattgatgccg
gagtacatattctacgatggcccgcctttcgccaccggccttccccactacggccacatc
ctcgccggcaccatcaaggacgtcgtcacccgctaccagtccatgaacgggcaccacgtc
acccgccgcttcggctgggactgccacggccttcccgtcgagttcgagatcgacaccaag
cttggaatccgcacccgcgacgacgtcctcgccatgggtatcgccaactacaatgaggag
tgccgcgccatcgtcacccggtacgtgaacgagtgggaagaggtgatcacgcgtacgggc
aggtggatcgacttcaagaacgactacaagacgatggacctcaagttcatggagtcggtg
tggtgggtgttcgcgcagctgtggaagaaggagctggtgtaccgtgggtttaaggtcatg
ccttacagcactgggtgcaagactccgctctcaaacttcgaagctgggctaaattacaag
gatgtctcggaccctgcaatcatggtgtcatttccgatagttggtgatcctcataatgca
gctcttgtggcttggacgacaactccatggacacttccaagtaatctcgctctctgcgtc
aatgctgatttcgtctacgtgaaggtcagagagaagtcttcaggagcaacttatgttgtt
gcagaatcccggttgtcccagttacctagcaaaaaatctaagtcagaatcaggtggagca
gttgtgcctgcacaggacgcatcactgcccaactccaagagtaagggaaccacaaacagc
aaagctaagagtggagttgatgctggatcctatcaattgatggagaaaataactggcgct
tcattggttggattaagatatgttcctctgtttgattacttcatgaattgttcggagaca
gcatttagggtagtatcagacaattatgttactgatgacagtggaactggggttgttcac
tgtgcacctgccttcggtgaagatgattaccgtgtttgtgttgcttctggtataatgaag
gatgtggatctgtttgtgccagttgatgctgatggctgctttactaaggagataactgac
ttctgtggccgctatgttaaggatgctgataaggatattattaatgctgttaaggtgaaa
ggcagacttgtaagtaatggaagtatcatgcattcttaccctttttgttggagatcagaa
acccctcttttatatagggctgttcctagttggtttgttgctgtcgaaaaaattaaattg
cagctgctcgaaagtaacaaacaaacatattgggttccagaatatgtcaaggaaaaaaga
tttcataattggctcgaaaatgctagagattgggctgttagtcgaagcagattctggggt
actcctcttcctgtttggactagtgaggatggcaaagagaagagagttattggttccatt
gaagaacttgagacgctatctggtgctaaggtcactgatctacatcgacacaatattgat
catataaccattccttctgaacatggatcagagtttggtgttcttcgccgtgttgatgat
gtatttgactgctggtttgagagtgggtcgatgccatatgcatatattcattatcctttt
gagaatgttgaagtctttgaaaagaactttcctggacacttcgtggctgagggccttgac
cagacccgaggatggttctatacactcatggttttgtctactgcactgtttgagaaacca
gcatttaggaatctcatttgcaatggtcttgtgttggctgaggatgggaagaaaatgagt
aaacggttgaagaattatccctcaccaactgaagtgataaatgattatggagcggatgca
ttgcgattatacctcattaattctcctgttgttcgtgctgagcctttgcggttcaaaaag
gatggtgtatatggtgtggtcaaggatgtcttccttccctggtataatgcatataggttc
cttgttcaaaatgcaaaaaggcttgaggttgagggttttgcaccatttgttcctattgat
tgtgaaactcttcagaactcttcaaatgtgcttgaccagtggatcaactctgctacagaa
agtttagtccactttgttcgtcaagagatggattcatatcgcttgtatacggttgtacca
tatcttctaaaattcattgacaaccttaccaacatatatgtgcgttttaatcggaagaga
ttaaaggggcgaaccggagaagaagactgcaggacttctctttctactctgtacaatgtg
cttttaactacttgtaaagtgatgtctccattcacacccttcttcactgaggttctttat
caaaacctgcgaaaagtctctgttggatctgaggaaagcattcattattgtagctttcct
tcagcaacaggaaagagagaagagcgcattgaacgaagcgtcatgaggatgatgactgtc
attgacctcgcccgcaacattagagagcgtcatagtaaacctctcaagacaccactaaag
gagatgatagttgttcatcctgattcagactttctggaagacattactggaaaactgaga
gagtatgtgttggaggagctcaatattaaatcagtggttccttgcaatgatcctttgaga
tatgcttctctaagggctgagcctgattttagtatattaggtaaaagactcgggaaagca
atgggtgctgttgctaaggaggttaagtcaatgtcgcaggctgatatattattatttgaa
caaactggggaggctacattctctgggcattgcttgaagcaaaatgatataaaggtattg
cgggagtttaaacgacctgctgatgtgacagaaaaagaaatagatgctgctggagatggt
gatgttttggtgatattggatttgcgagctgatgaatcattgtttgatgcgggagttgct
cgcgaggttgtgaacagaattcagaaattgcggaagaaagctggattagaacccactgat
attgtggaattatactatgaatctcttgagaaagatgaaaagatcttggaaaagattgtg
aattcccagggtgagtatatcaaagatgctcttggttctcctttacttcataaaagttgg
gctccatcagaagcttaccgttacttgcaggttattttctgtcaagaggagtttcaggtc
caattttctcatgaggaaatacccagtttgtcctttatcatcatcatagcaaagcccgcc
cttgtttttaatgctgaagccattgttgcactatattcaggaaataacaaatatgctgaa
aatttacaaacatatttgtcatcgcgagacctttacaatttgaagtcagagttccaagct
ggaaacggaaagatcaaggtagattgcattgagaaccagccatccgttgatttggagcag
gggaaacatctcttccttagtgtagcagatttctacttgagcaggaagacgggttga
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