Musa acuminata (dessert banana): 135609754
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Entry
135609754 CDS
T03447
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135609754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135609754
Spliceosome [BR:
mus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135609754
Complex C
U5 SnRNP specific factors
135609754
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFL1
EFG_III
Roc
Ras
EF-G_D2
Septin
Motif
Other DBs
NCBI-GeneID:
135609754
NCBI-ProteinID:
XP_064959417
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All DBs
Position
BXJ2-4:complement(6889416..6895487)
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AA seq
999 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIESDVGSDASDDDASTGDKSPAGSAPSDDGDAGAASPGAAANGW
ITSAAGPDDMDVDAAASQIVLAEDKKYYPTAEEVYGEGVETLVMDEDEQPLEQPIIKPVR
TLKFEVGVKDSSTYVSTEFLLGLASNPSLVRNVALVGHLQHGKTVFMDMLVEQTHEISTF
DVQNERHIRYTDTRIDEQERRISIKAVPMSLVLEDSNAKSYLCNIMDTPGHVNFSDEMTA
ALRLADGAVLVVDAAEGVMVNTERAIRHAIQERLPIVVVMNKVDRLITELKLPPTDAYFK
LRHTLEAINDLISSCSTTVGGTQMVDPVAGNVCFASANAGWSFTLQSFAKLYLKLHGIPF
DSVKFASRLWGDMYYHPDQRVFKKKPPMAGGERSFVQFILEPLYKIYSQVIGEHKKSVEA
TLAELGVTLSNAAYKLNVKPLLRLACSSVFGFATGFTDMLVQHIPSARDAATKKVEHIYT
GPQDSYIAEAMKNCDPYGPLMINITKLYPKSDCSVFDAFGRVYSGTIQTGQTLRVLGEGY
SPEDEEDMTVKEVTKLWVYQARYRIPISKAPAGSWVLIEGVDASIMKTATLCPLYMDEDV
YIFRPLRFNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGE
IYLDSIMKDLRELYSEVEVKVADPVVTFCETVVETSSMKCFAETPNKRNKITMVAEPLEK
GLAEDIENGVVSIDARQRDISDFFQKRYDWDLLSARSIWAFGPDKQGPNILLDDTLPSEV
DKNLLNAVRDSIVQGFQWGAREGPLCDEPIRNVKFKILNASIAPEPLHRGGGQIIPTARR
VVYSAFLMANPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTQDVPKPGTPVYIVKAF
LPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFM
VKTRRRKGMSEDVSINKFFDEAMVVELAQQAADVHLQIM
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcctctatgacgaattcggcaactacatcggcccggagatcgagtccgac
gtcggctccgacgcctccgacgacgacgcctccaccggagacaagtcccccgccggatcc
gccccatctgacgatggagatgccggcgcggcctcccctggcgctgcggccaacggatgg
atcaccagcgccgccggacctgacgacatggacgtcgacgctgccgcctcacagatcgtc
ctcgctgaggacaagaagtactatcccaccgccgaggaggtctacggagagggcgtcgag
acgctggtgatggacgaggacgagcagcctttggagcagcccatcatcaaacccgtccgc
acccttaagttcgaggtcggcgtcaaggactcctccacctacgtttccaccgagttcctg
ttgggcctcgcctccaacccttcgttggtccggaatgtggcgctcgtggggcacctccag
cacgggaagacggtgttcatggacatgctggtggagcagacgcacgagatctccacgttt
gatgtgcagaacgagcggcatataaggtataccgacactaggatcgatgagcaggagcgg
agaatctcgatcaaggcagtgcccatgtcacttgtgctcgaggatagcaatgccaagtcg
tatctctgcaacataatggacacgccaggccatgtcaatttctcagacgaaatgacagct
gcacttcgcctcgctgatggagctgtgttggttgtggatgctgcagaaggtgttatggtt
aacactgagagggctataagacacgcaatccaagagaggttgcccatagtggttgtaatg
aataaggttgatcgacttattacggagctaaaactccctcccactgatgcatattttaag
ttgaggcacacattggaagctatcaatgacttgatctcatcttgctcgacgactgttgga
ggcacccaaatggttgatcctgtggctggaaatgtttgttttgccagtgcaaatgctggc
tggtctttcacactgcagtccttcgctaagctatatcttaagcttcatggcataccattt
gactctgtgaagtttgcatcacgcttatggggggatatgtactatcaccctgaccaaaga
gtatttaagaagaaacctcctatggctggaggagagagatcatttgtacagtttattctt
gaaccattgtacaaaatctacagccaggtaattggagaacataagaagagtgttgaggca
acccttgcagaacttggagtcacactgagtaatgcagcttacaagttgaatgtgaagcct
ttactgagattggcttgcagctcggtctttggatttgcaactggcttcactgatatgctt
gttcagcacattccctcagctcgggatgctgcaacgaagaaggtggagcacatatataca
ggacctcaagactcttatattgctgaggctatgaaaaactgtgatccatatggtcccctt
atgattaatattacaaaactttatcctaagtctgattgtagtgtgtttgatgcctttggt
cgggtctatagtggtactatacagactggtcaaaccttgcgtgtacttggcgaaggatat
tcacctgaagatgaagaagatatgacagttaaagaagtcaccaagttgtgggtttatcag
gctcgatatcgtattcccatcagtaaagcccctgctggctcttgggttctaatcgaaggt
gttgatgcatcaatcatgaagacagcaacattatgccctttatatatggatgaagatgtt
tatatatttaggccccttcgcttcaacacattatcagttgtgaagactgcaactgagcca
ttgaatccaagcgagcttcccaagatggtggagggccttaggaaaattagtaagagttat
ccattagctattactaaggttgaggagtccggagagcacactatcctggggacaggtgag
atataccttgattcaataatgaaggacctgagggaactttactctgaagttgaagttaag
gtggcagatcctgttgtcactttttgcgagacagtggttgaaacttcatcaatgaagtgt
tttgctgaaacaccaaacaaaaggaacaaaattactatggttgcagagccactggagaag
ggtttggcagaagatattgagaatggtgttgttagtattgatgcacggcaaagagatatt
agtgatttcttccagaaacgctatgactgggatttgctttcagcgaggtctatctgggca
tttggtccagacaagcaggggcctaatatcttattagatgacacccttcctagtgaagtt
gacaaaaatctgttgaatgctgtcagagactccatcgttcaaggtttccaatggggtgcg
cgagaaggtcctctctgtgatgagcctatccggaatgtgaaattcaaaatcctgaatgca
tccatagctccagagccgttgcaccgaggtggtggtcagattatccccactgcaaggcgg
gtggtatattcagctttcctgatggcgaatcctcggcttatggagcccgtttactatgtt
gagatccaaacaccgatagattgtgtttctgctatttacacggtgctgtcacgaaggcga
ggacatgtaacacaagatgtgccgaagcctggcactcccgtatatattgtaaaggccttt
ttgcctgtgatcgagtcatttggatttgagacggacttaagataccatactcaagggcaa
gctttctgtctctctgtttttgatcactgggctatagttcctggtgatccattggacaag
aacatagttctccgtccccttgaaccggcaccaatacaacaccttgcacgtgaattcatg
gtcaagacacggcgtcgaaagggtatgagtgaagatgtaagcattaacaaattcttcgat
gaggctatggtggtggagcttgcccagcaggctgccgatgttcatctgcagattatgtaa
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