Musa acuminata (dessert banana): 135612045
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Entry
135612045 CDS
T03447
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor 4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
135612045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mus03000
]
135612045
Transcription factors [BR:
mus03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
135612045
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
135612045
NCBI-ProteinID:
XP_064963841
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Position
BXJ2-5:1418064..1421644
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AA seq
536 aa
AA seq
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MNQYVPDWTMEDDSGRLTDLLPMTNQRKPMGPDNELVELLWRNGHVVMHSQTHRRTPVGE
FKQASKPDPVQKYEQSLGDSSNLIQEAEAASWFQFPLDDSFEKEFCSEFFPEITGTDTVV
SENISKDFTAEEEDRYLKFGFTDDGTAFTAPAPKQSTPHPQDNIMPPPRPHVMGSTPQSS
SLENSNSGVLNFPHFSKQVKADLGSLSCRLGHRGSGSNSKAGAQESSMMTVGSSACGSNQ
IQAQTDPSNNISNDAADIVTRLREGTGMRLLSERMQSKAHEGTVTSSSGGSGCSYGRSAQ
QNESNHSHKRRRKARDVEESGCQSEEAEYESIDEKKQATRPTSKRRSRAAEVHNLSERRR
RDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQLQVQMMWMGSGMASMMFPCVQQ
YISGMGMGIGMSHASMSAIHSAVQLPRVPFVNASVAPVSSGNQASFLPSPAISAANFPSQ
MQNIHLPESYARYLGFHNFCAYGSHMVQHNQSAASPDTTLPSAAGGPTSIRNNKSD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatatgttcctgactggaccatggaagatgattctggacgtttgacagatctc
cttcccatgacaaatcaaaggaaaccaatgggacctgataacgagcttgtggagctgtta
tggaggaatggacatgttgttatgcacagccagactcaccggagaactccggtcggtgaa
ttcaaacaagcttcgaaacctgatccagtgcagaaatatgagcaatcccttggggattcc
agtaacttgatccaagaggctgaggctgcatcatggttccagttccctctcgatgactcc
ttcgaaaaagaattctgttctgagttcttccctgaaatcacaggcacagacacagttgtc
tccgaaaatatcagcaaggatttcactgcggaggaagaagataggtacttaaaattcggt
ttcaccgatgacggcactgctttcacagcacctgctcctaagcagtccactcctcatccc
caggacaacattatgccccctcctagaccacatgttatgggctctacgccacaatcttcc
tccttagaaaattctaacagtggtgtcctcaactttcctcacttctcaaagcaagtgaag
gctgatttgggatccttgagttgccgactggggcacagaggatctgggagcaatagcaag
gcaggtgcccaggagtcctcgatgatgacagttgggtcaagtgcttgtggaagtaatcag
attcaagctcagaccgatccaagcaataatattagcaatgatgcagctgacattgtcaca
agacttagagagggcactggcatgaggcttctctctgagagaatgcaatccaaggcacat
gaaggcactgtaacttcatcttcaggtggttctggctgcagttatggaagatcagcacag
cagaatgagagcaatcacagccacaagaggaggaggaaggcaagagatgtggaagaatct
gggtgccagagtgaggaagctgaatacgagtcaatcgatgagaagaagcaggctacacga
ccgacgtccaaacgaagaagccgtgctgccgaggtccacaatctctcagagaggcgaaga
agagatagaataaatgagaaaatgaaggctctgcaggagctcatacctcattgcaacaag
acagataaagcatcaatgctggatgaagcaattgagtacctgaaaacgcttcagctgcaa
gttcagatgatgtggatgggaagtggcatggcgtcgatgatgtttccatgtgtccaacaa
tacatttcaggcatgggaatgggaattggaatgagtcatgcatccatgtctgctattcat
agtgcagttcaattgccaagagttccatttgtcaatgcatctgtagccccagtttccagc
ggaaaccaggcatcatttttaccctccccagctataagtgcagcaaactttcccagccag
atgcagaacattcatcttcccgaatcatatgcccggtaccttggttttcataacttttgt
gcatatggatcgcacatggtgcagcataatcaatcagcagcatcacctgataccactctc
ccgtctgctgccggaggacctacaagtatcaggaacaacaaatctgattaa
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