Musa acuminata (dessert banana): 135615614
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Entry
135615614 CDS
T03447
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor 4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
135615614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mus03000
]
135615614
Transcription factors [BR:
mus03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
135615614
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
135615614
NCBI-ProteinID:
XP_064970461
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Position
BXJ2-6:complement(40886509..40891150)
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AA seq
427 aa
AA seq
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MKQYAPNWSLEDQKKPMGLDSELVELLWQDMHVAMHTQSNHGASAINDESKPEQEPQCER
SLARSAGLIQIDETVSWLQYPLDDPPAKEFCSDFFSEMAGIGVIGVPTESTAFTATCPPR
PPQSCNAQASSFGDGDASICGSNQIHAQADLSRDSAAAAAKGMPSETEQKHAYETTLTSS
SGGSDCSVRRMRKQIFGSNRSQKRRKRDADDREYQSEEAEIEWMEAKKLAQRSTATRRSR
AAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIGYMKSLQLQVQMMWMGS
AMAQMMFPGVQQYMSHASVPWMHHAVQVPSVPVIHHSAGSYTNHLCLSPALHAANFQNQM
QGFHLQESSYVPCHGFHHLQPHSQETNPCSHGSLTEQQNHPAAIPCSSILPCAGPAPCEN
TNDSISE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtatgcccccaactggagtttggaagatcaaaagaaacccatggggctggac
agtgagcttgtagaactgctgtggcaagatatgcatgtcgccatgcatacccagagtaat
cacggagcctctgccatcaatgatgaatccaaaccagaacaagaaccacaatgcgagcgg
tcacttgctagatccgccggcctgatccagatcgacgaaaccgtgtcatggttgcagtac
cctctcgacgacccgccagccaaagaattctgctccgacttcttctcggaaatggcgggc
atcggtgtcatcggtgtgcccactgagagcactgctttcacagcaacttgtcctcctagg
ccaccacagagttgtaacgctcaggcttcttcgtttggtgatggagatgcaagcatctgc
ggaagtaatcagatccatgcacaggctgatctgagcagggattctgctgccgctgctgct
aaaggaatgccatcagaaactgagcagaaacacgcatatgaaactactcttacttcatcc
tcgggaggttctgattgcagcgtcagaagaatgagaaagcagatttttggaagcaatcgg
agtcaaaagagaaggaaaagagatgcggatgatcgagaatatcaaagcgaagaggctgag
atcgagtggatggaggcgaagaagctggctcagcgatcgacggctactcgtagaagccga
gctgctgaggtccacaacctctccgagaggagaagaagagacagaatcaatgagaagatg
aaggcactgcaagagttgatacctcgttgcaacaagacagacaaagcatcaatgctggat
gaggctattggatatatgaagtcacttcaactgcaagttcagatgatgtggatgggaagt
gccatggcacaaatgatgttcccaggtgtccaacaatacatgtctcatgcttctgttcct
tggatgcatcatgcagttcaagtaccaagtgtgccagttatacaccactctgcaggctca
tacacaaaccatttatgcctttctccagccctgcatgcagccaatttccagaatcagatg
cagggcttccatctccaagaatcatcatatgtcccctgccatggctttcatcatcttcaa
cctcattctcaggagaccaatccatgcagccatggatcactcacagagcagcagaatcat
ccagcagctataccttgtagcagcatcctcccttgtgctggaccagctccttgtgaaaac
accaatgacagcatatctgagtga
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