Mucilaginibacter sp. cycad4: SNE26_26580
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Entry
SNE26_26580 CDS
T10709
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
muy Mucilaginibacter sp. cycad4
Pathway
muy01501
beta-Lactam resistance
muy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
muy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SNE26_26580
01503 Cationic antimicrobial peptide (CAMP) resistance
SNE26_26580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
muy02000
]
SNE26_26580
01504 Antimicrobial resistance genes [BR:
muy01504
]
SNE26_26580
Transporters [BR:
muy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SNE26_26580
Antimicrobial resistance genes [BR:
muy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SNE26_26580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
JetA
Motif
Other DBs
NCBI-ProteinID:
WPU99586
LinkDB
All DBs
Position
6410398..6413646
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AA seq
1082 aa
AA seq
DB search
MVTSALKKPVTTVVITFSLLIFAVLSAINIPIDIFPQLNLPTIYVIESYGGMSPQQMEGF
FSTRLQDQFLYVNGVKNITSKNIQGLTMLKLSFYESTNMAEAQAQVALQVNRAMKFFPPG
ALPPQVVRFDASSLPVGQMVLSAPSRSLKEIYDLAATKVRPMFASVPGLSAPPPFGANSR
SITVNVDPNKLRSYGITADEVVGALANFNVMSPSGNLRLGNTMFVTTINTLIKQPDQFGD
IPVITKNGVPVLVKDIAHVADASDVTVDYALINGKRSVYIPVVKTADASTWSVVQALKSK
IPEIQSLLPDDVKISYEFDQSIFVINAVKSLITEGGLGAILTGLMVLLFLGDWRSSLIVV
ITIPVSILLGVLLLGLFGQTINIMTLSGLALAIGILVDQATVTIENIHQHLEMGKNKAQA
IYDACQEISFPLLLILLCILAVFAPSFMMNGVPKAMFLPLSLSIGLTMIVSYIIAQTLVP
ILSNWLIKAETYQHYEHGKLHAHAGEALDRPEEGQVNHHLQQEQKHPEKNDLFERVKMRF
MRIIESWMPRKKLIVPVYLVVVLGLAGACFVFIGKDMMPKLNNGQFQIRIKEPDGTRLER
TEGKLKQVLQIIDSTVNHHVAITSGYVGIVPSSYGTSNLYVFNTGTHEAVLQVNLDEDYH
INMDDLKDALRKNIASRIPGLRITFEPIDMTEKIMSQGASTPIEIRVAGKDMAQIEGYSN
KVLAGLKKISYLRDVQINQPLKFPVVAITLDRLKAAQLGLDIKDIARSVTASTSSSRFTE
KNQWLDEKSAYTYQVQVQIPEYVMNTMDELKEIPLVRGQSTPVLGDIASFKVNYVPGEYD
RAGPRRFLTVSANIYKKDLGTATAAVQQAIKSAGTPPKGLLAEIKGMSSLLTETLDSLQN
GLLFAILVIFLLLAANYQSFKLSLTVLSTVPAVILGSLTALLLTGSTLNLQSYMGMIMST
GVSVANAILIVTNAETLRLDYKDSTRAAITSASIRLRPILMTSLAMMAGMVPMASGMGEA
GEQTAPLGRAVIGGLFASTLAALFILPQVFAWVQQKTTYDSPSLMKDVNVNGPQQQLETF
NS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggtcacatcagcactaaaaaagcctgtcactactgtagtgataacctttagcctgctc
atatttgcagtgcttagtgcaataaatattcctatagatatcttcccgcagctaaacctg
cctactatatatgttatagaatcgtacggggggatgtctccgcagcaaatggagggtttc
ttttccacccgtttgcaagatcagtttttatatgttaacggtgtaaaaaacattaccagt
aaaaatatacagggcttaaccatgcttaagcttagtttttatgaaagcaccaatatggct
gaagcacaggcgcaggttgccctacaggttaaccgggctatgaagttttttccgccaggt
gccttaccgccgcaagtggtaagatttgatgcatcatcattacctgtagggcaaatggtg
ctatcggccccatcgcgcagccttaaggaaatttacgatttggcagccaccaaagtaagg
ccgatgtttgcttcagtaccggggctttcggcgccgccgccgtttggcgccaattcaagg
tcgatcactgtaaacgtcgaccctaataaattacgcagttacggcatcacggccgatgag
gtggtaggcgcactggccaacttcaacgtgatgtcgccatcaggtaaccttcggttgggc
aacaccatgtttgttaccaccattaatacgcttattaaacaacccgaccaatttggcgat
atcccggtgataaccaaaaacggggtgcctgttttggtaaaagacattgcccacgttgcc
gatgccagcgatgttacggtggattacgcattaataaacgggaagcgttccgtttacatc
ccggtggtaaaaaccgccgatgccagtacctggagtgtggtacaggcgctaaaaagtaag
atccctgaaatacaaagccttttgcccgatgatgtgaagatctcgtatgagtttgaccaa
tccatcttcgtgataaacgcggtaaaaagcctgataaccgaaggtggtttaggtgctata
ctcaccggtttgatggtgctgctgtttcttggcgactggcgcagcagtttaattgtggtg
atcaccatcccggtatctatattattaggggtattgctgctgggcctgtttggtcaaacc
atcaacattatgacactgagcgggctggccctcgccatcgggatcctggtcgatcaggca
acagtaaccatcgaaaatattcaccagcacctggagatgggcaaaaacaaggcacaggct
atttatgatgcctgccaggagatttcgttcccgttgttgctcattctgctttgtatcctt
gccgtatttgcgccgtcgtttatgatgaacggtgtgccaaaggcaatgtttttgcctctg
tcgctgtccattggtttaactatgatcgtatcgtacatcatagcgcaaacgctggtgcct
attttatcaaactggcttatcaaggccgaaacctatcagcattatgagcatgggaaattg
catgcccatgccggcgaagctttagaccggccggaagaaggacaggtaaaccaccacctg
cagcaggagcagaaacatcccgaaaagaacgacctgtttgaacgggtaaaaatgcgtttt
atgcgaatcattgaaagctggatgcccaggaaaaaactgatagtgcccgtataccttgtg
gttgttttgggattggccggggcctgctttgtttttatcgggaaggatatgatgccgaag
ctcaacaacggccagttccagatcaggatcaaagaacccgatggtacaaggcttgagcgc
actgaaggtaagctgaaacaggtactgcaaattatcgacagcacggtaaaccatcacgta
gccattacatcgggctatgtggggatagtgcccagcagctacggtaccagtaacctttat
gtatttaataccggtactcatgaggctgttttacaggttaaccttgatgaggattaccac
atcaacatggatgacctgaaagatgccctgcgcaaaaatatcgcctcccgtatccccggg
ttgcgtatcacctttgaacctatcgatatgacggagaagatcatgagccagggcgcatct
acacctatcgaaataagggtagctggtaaggatatggcgcagatagaaggctactcgaac
aaagttttggccggccttaaaaagatcagctacctgcgggatgtgcagattaaccagcct
ttaaaattcccggtggtggcaataacgctggacaggttgaaagccgcccagttgggcctg
gatattaaagatattgcccgctcggttacggcaagtacctcatcaagccgctttaccgaa
aaaaatcaatggctggatgaaaaatctgcctacacctaccaggtgcaggtacagatcccc
gagtacgtcatgaataccatggatgagttgaaggagatcccgctggtaagggggcaaagc
acaccggtactgggcgatattgccagcttcaaggttaactatgtacctggcgaatatgac
cgcgccggcccgaggcgttttttaactgtaagcgctaatatttataaaaaggatttgggt
acggctactgctgctgtacagcaagccattaaatcagctggtactcctcccaaaggtttg
ctggccgaaattaaggggatgtcgagcctgctaacagaaactttggatagcctgcaaaac
ggcttattgtttgccatcctggtgatctttttgttgctggctgctaattatcagtcgttt
aaactatcgctcacagtactttcaactgtgccggcggtaatattgggttcgctgaccgct
ttgttactcaccggctctacacttaacctgcaaagttatatggggatgatcatgtctacc
ggtgtgtcggtagctaacgccatcctgatcgtaaccaatgccgaaacattaaggctcgat
tataaggactcgacgagggcggctattaccagcgcgtctatcaggttaagacctatcctc
atgaccagtttggctatgatggcaggcatggtccccatggcatcgggcatgggcgaagcc
ggcgagcaaacagctcctttgggccgcgcggtgataggcggcttatttgcctcaacatta
gctgccctgtttatactaccgcaggtatttgcctgggtgcagcaaaaaaccacttatgat
tcaccatccttaatgaaggatgtaaatgttaatggacctcaacaacaacttgaaaccttc
aacagttaa
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