Mycolicibacterium vanbaalenii: Mvan_2112
Help
Entry
Mvan_2112 CDS
T00449
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mva
Mycolicibacterium vanbaalenii
Pathway
mva03030
DNA replication
mva03410
Base excision repair
mva03420
Nucleotide excision repair
mva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mvan_2112
03410 Base excision repair
Mvan_2112
03420 Nucleotide excision repair
Mvan_2112
03430 Mismatch repair
Mvan_2112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mva03032
]
Mvan_2112
03400 DNA repair and recombination proteins [BR:
mva03400
]
Mvan_2112
Enzymes [BR:
mva01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Mvan_2112
DNA replication proteins [BR:
mva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mvan_2112
DNA repair and recombination proteins [BR:
mva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Mvan_2112
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mvan_2112
MMR (mismatch excision repair)
DNA ligase
Mvan_2112
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mvan_2112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ABM12927
UniProt:
A1T6X7
LinkDB
All DBs
Position
2252981..2255104
Genome browser
AA seq
707 aa
AA seq
DB search
MSSKATQDPEAVLAEQSDDATEAGLRRQWQELADEVRDHQFRYYVRDAPIITDAEFDAML
RRLEALEEAHPELRTPDSPTQLVGGAGFATDFTAAEHLERMLSLDNVFTPDELAAWAARI
RTEIGADAQYLCELKIDGVALSLVYRDGRLERGATRGDGRTGEDVTLNARTIEDVPEKLT
GTEEFPLPSVLEVRGEVFFRIADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTAR
RRLRMICHGLGHIEDAAGFPFRTLHDAYRALQAWGLPVSPHTAQVTGLDAVTERIAYWGE
HRHDVEHEIDGVVVKVDEVALQRRLGATSRAPRWAVAYKYPPEEAQTKLLDIRVNVGRTG
RVTPFAYMEPVKIAGSTVGLATLHNGSEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLR
DGSEREFVMPTHCPECGTELAPAKEGDADIRCPNSRTCPAQLRERVFHVAGRGAFDIEGL
GYEAAIALLQARVITDEGDLFTLTADDLLRTDLFTTKAGELSANGKRLLTNLGKAKAQPL
WRVLVALSIRHVGPTAARALATEFGSLDAIVAASEEELAAVEGVGPTIAAAVTDWFTVDW
HRTIVDKWRAAGVRMADERDASIERTLDGLSIVVTGSLTGYSRDEAKEAIIARGGKAAGS
VSKKTAYVVAGDSPGSKYDKAIELGVPVLDEDGFRRLLENGPDTPDS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgagttccaaggcgacccaggatcccgaggcggtgctggccgagcagtccgacgacgcc
actgaagccggcctgcgccggcaatggcaggagctcgccgacgaggtgcgcgaccaccag
ttccgctactacgtgcgtgacgcgccgatcatcaccgacgccgagttcgacgcgatgctg
cgcaggttggaggccctcgaggaggcccaccccgagctgcgcaccccggattcaccgacc
cagctggtgggtggggccgggttcgccaccgatttcaccgccgccgagcacctcgagcgg
atgctcagcctggacaacgtgttcacccccgacgagctcgccgcctgggccgcccggatc
cgcaccgagatcggtgcggacgcccaatacctgtgcgagctgaagatcgacggggtggcg
ctgtcgctggtctaccgcgacggccggctggagcgtggggccacccgcggtgacggccgc
accggtgaggacgtcacactcaatgcccgcaccatcgaggacgttcccgaaaagctcacc
ggcactgaggaattcccgcttcccagcgttctcgaggtgcgcggtgaggtgttcttccgg
atcgccgacttcgaggacctcaacgccgggctggtcgccgagggcaaaccgccgttcgcc
aacccccgtaacagcgcggccggctcgctgcgccagaagaacccggccgtcaccgccagg
cgcaggctgcggatgatctgccacggcctcggccacatcgaagacgctgcgggcttcccc
ttcaggacgttgcacgacgcgtaccgcgcgctgcaggcctgggggttgccggtctcacca
cacaccgcccaggtcaccggcctggacgcggtcaccgaacgcatcgcctactggggcgag
caccggcacgacgtcgagcacgagatcgacggcgtggtggtcaaagtggacgaggtggcg
ctgcaacggcgcctcggggccacgtcgcgcgccccgcgctgggcggtcgcctacaagtat
ccgcccgaggaggctcagaccaagctgctcgacatccgggtcaatgtcggacgcaccggc
cgggtgaccccgttcgcctacatggagccggtcaagatcgcgggctccacggtcgggctg
gccacgctgcacaacggctccgaggtcaaacgcaagggcgtgctgatcggcgacaccgtg
gtgatccgcaaggccggcgacgtgattcccgaggtgctcggaccggtcgtcgatctgcgc
gacggcagcgagcgcgaattcgtgatgccgacgcactgcccggagtgcggcaccgaactg
gcccccgccaaggagggcgacgccgacatccgctgccccaactcccgcacctgcccggcg
cagttgcgggagcgggtctttcacgtcgcgggccggggcgccttcgacatcgagggcctg
ggctacgaagccgcgatcgcgctactgcaggcccgcgtcatcaccgacgaaggcgacctg
ttcacacttaccgcagacgacctgctgcgcaccgacctgttcaccaccaaggccggcgag
ctgtccgccaacggcaagcggctgctcaccaacctgggcaaggccaaggcccaaccgttg
tggcgggtgctggtggcgctgtcgatccggcacgtcggaccgacggcggcgcgtgcgctg
gccaccgagttcggcagcctcgacgcgatcgtcgcggcctcggaggaggaactggccgcc
gtcgagggcgtcggccccacgatcgcggctgcggtcaccgactggttcaccgtcgactgg
caccgcacgatcgtcgacaagtggcgcgctgccggggtgcggatggccgacgagcgcgac
gccagcatcgaacgcactctggatgggctgtcgatcgtcgtcaccggatcgctgaccggc
tacagccgcgacgaggcgaaggaggccatcatcgctcgcggcggcaaggcggccggttcg
gtgtcgaagaagaccgcctatgtggtggccggcgactcgcccgggtccaagtacgacaag
gccatcgagctgggagtgccggtgttggacgaggacgggttccgccggctgctcgaaaac
gggcccgacacaccggactcctag
DBGET
integrated database retrieval system
