Massilia varians: MasN3_10400
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Entry
MasN3_10400 CDS
T08769
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
mvar
Massilia varians
Pathway
mvar00270
Cysteine and methionine metabolism
mvar00450
Selenocompound metabolism
mvar00670
One carbon pool by folate
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01230
Biosynthesis of amino acids
mvar04980
Cobalamin transport and metabolism
mvar04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MasN3_10400 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MasN3_10400 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MasN3_10400 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MasN3_10400 (metH)
04980 Cobalamin transport and metabolism
MasN3_10400 (metH)
Enzymes [BR:
mvar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
MasN3_10400 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
BDT57546
LinkDB
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Position
complement(1154181..1157951)
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AA seq
1256 aa
AA seq
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MNAPIRSISPIDSQLRDILKRRIMILDGAMGTIIQQYKLDEAAYRGERFKDFSAPEGAGQ
RELFVKGNNELLTLTQPQIIQEIHERYLAAGADLIETNTFGATGVAQEDYHMAHLAYEMN
VEAARLARAACDKYSTPDKPRFVAGALGPTPKTASISPSVTDPAFRNITFDQLVASYHEQ
VRGLVVGGADVLLVETIFDTLNCKAALFAIDLYFEEHPETPRLPLMISGTVTDASGRILS
GQTVAAFWNSVRHAKPLTVGLNCALGAALMRPYAEELSQIADTFVCIYPNAGLPNPMSDT
GFDELPSDTSALLREFADAGFVNIAGGCCGTTPDHIAAISKILEASPPRQVPDVPVAMRL
SGLEPFTIDDSSLFVNVGERTNVTGSKAFARMILNEQFDEALSVARQQVENGAQVIDINM
DEAMLDSVAAMTRFLNLIASEPDISRVPIMIDSSKWSVIEAGLKCVQGKAIVNSISLKEG
EEEFIRQATLCRRYGAAVIVMAFDEQGQADTFARKTEICARAYQVLVEKVGFPPEDIIFD
PNIFAIATGIEEHNNYAVDFIEATAWIRKNLPHAKVSGGVSNVSFSFRGNDPAREAIHTV
FLYHAIKAGMTMGIVNAGMVGVYDDLPAELRERVEDVVLNRREDATERMIEFAGTLKAGA
GKQEQNLEWREAKVEKRLAHALVHGITQWIVEDTEEMRQQVLAAGGRPIHVIEGPLMDGM
NIVGDLFGQGKMFLPQVVKSARVMKQAVAHLVPFIEEEKAEEERRTGIVAKPKGKMVIAT
VKGDVHDIGKNIVSVVLQCNNFEIVNMGVMVPAADILAKAKEENADMVGLSGLITPSLEE
MAHVAREMQRDPYFREKKIPLLIGGATTSRAHTAVKIAPHYEGPVVYVPDASRSVSVGQS
LLTDDVREAYIIELAQDYERIRVQHANKKALPMLTLEQARGNKAKLAYAPVKPKFIGRRV
FKNVDLGELARYIDWGPFFQTWDLAGPYPAILTDEVVGEAATKVFAEAQAMLKKIIEGRW
LTANGAIALLPANAVNDDDIEIYTDESRKDVAFTWYGLRQQGVKPVVDGAQRPNQCLADF
VAPKDSGIADYIGMFAVTAGLGIEKHEQRFEAAFDDYSSIMLKALADRLAEAFAEYLHER
VRTDLWGYAAGEDLSNEALIKEAYSGIRPAPGYPACPEHTVKAELFRTLQAQEFGMELTE
SFAMYPGAAVSGFYFAHPDSKYFVVGKIGEDQLEDMARRRGMDKSELERYLAPNLS
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccaatccgctccatctccccgatcgattcccagctgcgcgacatcctgaag
cgccgcatcatgatcctggatggcgcgatgggcaccatcatccagcagtacaagctcgat
gaagccgcctaccgcggcgaacgcttcaaggacttcagcgcgcccgaaggcgcgggccag
cgcgagctcttcgtcaaggggaacaacgagctgctcaccctcacccagccgcagatcatc
caggaaatccacgagcgctacctggccgccggcgccgacctgatcgagacgaataccttc
ggcgccaccggcgtggcccaggaggactaccacatggcgcatctcgcctacgagatgaac
gtggaagccgccaggctcgcgcgcgccgcctgcgacaaatactccacgccggacaagccg
cgttttgttgccggcgccctcggcccgaccccgaagaccgcctcgatctcgcccagcgtg
accgacccggccttccgcaacatcaccttcgaccagctggtcgcctcctaccacgagcag
gtacgcggcctggtcgtcggcggtgccgacgtgctgctggtcgagaccatcttcgacacc
ctgaactgcaaggccgcgctgttcgcgatcgacctgtatttcgaggagcatccggaaacc
ccgcgcctgccgctcatgatctccggcaccgtcaccgatgcctcgggccgcatcctgtcg
ggccagaccgtggccgccttctggaactcggtgcggcacgccaagccgctgaccgtcggc
ctgaactgtgcgctcggcgccgcgctgatgcgcccctatgccgaagagctgtcccagatc
gccgataccttcgtctgcatctacccgaacgccggcctgcccaatccgatgagcgacacc
ggcttcgacgagctccccagcgacacctcggccctgctgcgcgaattcgccgatgccggc
ttcgtcaacatcgccggcggctgctgcggcactacgccggaccacatcgccgccatttcg
aagattctcgaagcgtcgccgccgcgccaggtcccggacgtgccggtcgcgatgcgcctg
tcgggccttgagcccttcaccatcgacgacagttcgctgttcgtcaacgtcggcgagcgc
accaacgtcaccggttccaaggcgtttgcccgcatgatcctgaacgaacagttcgacgaa
gcactgtcggtggcgcgccagcaggtcgagaacggcgcccaggtcatcgacatcaacatg
gacgaggcgatgctcgactccgtggccgcgatgacgcgcttcctgaacctgatcgcctcc
gaaccggacatctcgcgcgtgccgatcatgatcgactcctccaagtggagcgtgatcgag
gccggcctgaagtgcgtgcagggcaaggccatcgtcaactcgatctcgctgaaggaaggc
gaggaagaattcatccgccaggcgaccctgtgccgccgctacggcgccgccgtcatcgtg
atggccttcgacgaacagggccaggccgacaccttcgcgcgcaagaccgagatctgcgcc
cgcgcctaccaggtgctcgttgaaaaagtcggcttcccgccggaagacatcatcttcgac
ccgaacatcttcgcgatcgccaccggcatcgaggagcacaacaactatgcggtggacttc
atcgaagccaccgcctggatccgcaagaacctgccgcatgcgaaggtctcgggcggcgtg
tcgaacgtctcgttcagcttccgcggcaacgacccggcgcgcgaggcgatccacaccgtg
ttcctgtaccacgcgatcaaggccggcatgaccatggggatcgtcaacgccggcatggtc
ggggtctacgacgacctgcccgccgaactgcgcgagcgggtcgaggacgtggtgctgaac
cgccgcgaggacgccaccgagcgcatgatcgaattcgccggcaccctgaaggccggcgcc
ggcaagcaggaacagaacctcgagtggcgcgaagcgaaggtcgaaaagcgcctggcgcac
gcgctggtgcacggcatcacccagtggatcgtcgaggacaccgaagagatgcgccagcag
gtcctggctgccggcgggcgtccgatccacgtgatcgaaggcccgctgatggacggcatg
aacatcgtcggcgacctgttcggccagggcaagatgttcctgccccaggtggtcaagtcg
gcgcgcgtgatgaagcaggccgtggcccacctggtgcccttcatcgaagaagagaaggcg
gaagaagaacgccgcaccggcatcgtcgccaaaccgaagggcaagatggtcatcgccacc
gtcaagggcgacgtgcacgacatcggcaagaacatcgtctcggtggtcctgcagtgcaat
aacttcgagatcgtcaacatgggcgtgatggtgccggccgccgacatcctggccaaggcc
aaggaagagaacgcggacatggtcggcctgtcgggcctgatcacgccttcgctcgaggag
atggcccacgtggcgcgcgagatgcagcgcgatccctacttccgcgagaagaagatcccg
ctcctgatcggcggcgccaccaccagccgcgcccacaccgccgtcaagatcgcgccgcac
tacgaaggcccggtggtctacgtgccggacgcctcgcgttcggtgtcggtgggccagtcg
ctgctgaccgacgacgtgcgcgaggcctacatcatcgagctggcccaggactacgagcgc
atccgcgtgcagcacgccaacaagaaggcgttgccgatgctcaccctggaacaggcgcgc
ggcaacaaggccaagctcgcctacgcgccggtgaagccgaagttcatcggacgccgcgtc
ttcaagaacgtcgatctgggcgagctggcgcgctacatcgactggggtcccttcttccag
acctgggacctggccggcccctaccctgccatcctcaccgacgaggtggtgggcgaagcg
gccaccaaggtgttcgcggaagcccaggcgatgctcaagaagatcatcgaaggccgctgg
ctgaccgccaacggcgccatcgcgctgctgccggcgaacgcggtgaacgacgacgacatc
gaaatctataccgacgaatcgcgcaaggacgtcgccttcacctggtacggcctgcgccag
cagggcgtcaagccggtggtcgacggcgcgcagcgcccgaaccagtgcctggccgacttc
gtcgcacccaaggattccggcatcgccgactacatcggcatgttcgccgtcacggcaggc
ctggggatagagaagcacgagcagcgcttcgaagcggccttcgacgactactcctcgatc
atgctcaaggccctggccgaccgcctggccgaagccttcgccgagtacctgcacgaacgc
gtgcgtaccgacctgtggggttatgcggcgggcgaggatctgtcgaacgaagcgctgatc
aaggaagcctacagcggcatccgtccggcgccgggctatccggcctgcccggaacacacc
gtcaaggccgagctgttccgcactctgcaagcgcaagagtttggcatggagctgaccgag
tccttcgcgatgtatccgggcgccgcggtgtcgggcttttatttcgcccacccggactcg
aagtacttcgtggtcggcaagatcggcgaagaccagctcgaggacatggcgcgccgccgc
ggcatggacaagagtgagctcgagcgttatttggcgccgaacctgtcctga
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