KEGG   Microterricola viridarii: AWU67_04365
Entry
AWU67_04365       CDS       T04252                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mvd  Microterricola viridarii
Pathway
mvd03030  DNA replication
mvd03410  Base excision repair
mvd03420  Nucleotide excision repair
mvd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mvd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWU67_04365
   03410 Base excision repair
    AWU67_04365
   03420 Nucleotide excision repair
    AWU67_04365
   03430 Mismatch repair
    AWU67_04365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mvd03032]
    AWU67_04365
   03400 DNA repair and recombination proteins [BR:mvd03400]
    AWU67_04365
Enzymes [BR:mvd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AWU67_04365
DNA replication proteins [BR:mvd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AWU67_04365
DNA repair and recombination proteins [BR:mvd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AWU67_04365
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWU67_04365
   MMR (mismatch excision repair)
    DNA ligase
     AWU67_04365
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AWU67_04365
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 DNA_ligase_ZBD BRCT HHH_5 HHH PTCB-BRCT Zn_ribbon_CLPX_N
Other DBs
NCBI-ProteinID: AMB58211
UniProt: A0A0Y0NEI5
LinkDB
Position
975221..977551
AA seq 776 aa
MSETAEVFDIADFETARAESEALRERIERHRIAYHSEGVSLVSDAEYDADMHRLEALERA
FPELVGQDSPTQQVGAALVDSGFPPHEHAERMLSLDNVFSIEEFDEWAAKTAEAAGRPVR
WLSELKIDGLAISLAYRDGVLETATTRGDGRTGEDITENVDWIPVIPRTLTPAEDGTAFP
PFFEVRGEVFIRTADFTAMNERQHELQAAYAEEQRSKGRADADIPTRYAEFANARNAAAG
SLRQRRSKKTDAELALMRERLGRLSLYLHGIGAWPDPPVAAQSEVYELLAGWGLPVSPHS
RVWETAAEVAAFIADRGEHRHDIEHEIDGIVVKVDELELHAELGATSRAPRWAIAYKYPP
EEVHTTLLDIVVGVGRTGRVTPYAVMEPVKVAGSTVRQATLHNQEVVKAKGVLIGDTVVL
RKAGDVIPEILGAVLEKRDGTEREWRMPANCPECGTPLRPMKEGDIDLRCPNARGCPAQV
RGRVEHIGSRGGLDIEELGEVSAAALTQPLVPAVPPLPTEAGLFELTIEDLVPIEVVVRD
SETGLPKTDDEGNHKVRAPFRRNPTPAEKKSGAEGPFASKSAANLIAELEKAKTKPLWRI
LVSLNIRHVGPVAARALADHFGSLEAIRAGTAEELAEVEGVGGIIAESVLEWFEHDWHRD
IVDRWASAGVQFDTPGHPGPGAAAAAGGVLAGLTVVATGSLDGYTRDGAQEAIIAAGGKA
ASSVSKNTDFVAAGPGAGSKLAKAEALGIPVLDAAGFRLLVEQGPAAVAARPDAAE
NT seq 2331 nt   +upstreamnt  +downstreamnt
gtgagcgagacggctgaagtttttgacatcgcagactttgagactgcccgcgcagaatcg
gaggcgctccgcgagcgcatcgagcggcaccggatcgcgtaccactccgagggcgtcagc
ttggtcagcgacgccgagtacgacgcagacatgcaccggcttgaggcgctggagcgggca
ttccccgaactcgtcggccaggacagccccacccagcaggtcggcgccgcgctggtagac
agcggcttcccgccgcacgagcatgccgagcggatgctcagcctcgacaacgtgttcagc
atcgaggagttcgacgagtgggccgcgaagacggccgaggctgccggccggccggtgcgc
tggctgagcgagctgaagatcgacgggctggcgatcagcctggcctaccgcgacggcgtc
ctcgagacggcgaccacccgcggcgacggccgtaccggcgaagacatcacagagaacgtg
gactggatccccgtcatcccgcgcaccctcacgccggccgaggacggcacagccttcccg
ccgttcttcgaggtgcgcggcgaggtgttcatccgcaccgccgacttcaccgcgatgaac
gagcgccaacacgagctgcaggccgcctacgccgaggagcaacgctccaaggggcgcgcg
gatgccgacatccccacccgctacgccgaattcgccaacgcccgcaacgcagcggccggc
agcctccggcagcgccggtcaaagaagacggacgccgagctggccctgatgcgggagcgg
ctcggtcgcctctcgctctacctgcacggcatcggcgcgtggccggacccgcccgtcgcc
gcccagtccgaggtgtacgagctgctggccggctggggcttgcccgtctctccgcacagc
cgcgtctgggagacggccgctgaggtggccgcgttcatcgctgaccgcggcgagcaccgc
cacgacatcgagcacgagatcgacggcatcgtcgtcaaggtcgacgagctcgagctgcac
gccgagctcggcgcaaccagccgggcgccgcgctgggcgatcgcctacaagtacccgcca
gaagaagtgcacaccacgctgctcgacatcgtcgtcggcgtcggccgcacgggccgggtc
acgccctacgcagtgatggagccggtgaaggtggccgggtccactgtgcgccaggcaacg
cttcacaaccaggaggtcgtcaaagcgaagggcgtgctgatcggcgacaccgtcgtgctg
cgcaaggccggcgacgtcatccccgagatcctcggcgccgttctcgagaagcgcgacggc
acagaacgcgagtggcggatgcccgcgaactgcccggaatgcggcacaccgctgcgcccg
atgaaggagggcgacatcgacctccgctgcccgaatgcccgaggctgccccgcccaggtg
cgcggtcgcgtcgagcacatcggctcccgtggcgggctcgacatcgaagagctcggcgaa
gtgtcggccgccgcgctcacccagccgctggttcctgccgttccgccgctgcccacagag
gccgggctgttcgagctgaccatcgaagacctggtgccgatcgaggtcgtcgtgcgcgac
tcggagaccgggctgcccaagacagatgatgagggcaaccacaaggtgcgcgccccgttc
cggcgcaaccccaccccggcagagaagaagtccggcgccgaggggccgttcgcctcaaag
tcggcggccaacctcatcgccgagctcgagaaggccaagacgaagccactctggcggatc
ctggtgtcgctgaacatccgccacgtcgggcccgtcgcggcccgtgcgctggccgaccac
ttcggctcgctcgaggcgatccgggccggaacggcggaggaactcgcggaggtcgagggc
gtcggcggaatcatcgccgagtcggtgctggaatggttcgagcacgactggcaccgcgac
atcgtcgaccgctgggcgtcagcgggcgtgcagttcgacacccccggccaccccggcccg
ggtgcggccgcagcagccgggggagtgctggccggcctgaccgtcgttgccaccggcagc
ctggacggctacaccagggacggcgcccaggaggcgatcatcgcggccggcggcaaggcg
gcgtcgagcgtctccaagaacacggatttcgtcgcggctggtcccggtgccggttccaag
ctggccaaggccgaggcgctcggcatccccgttctggatgccgcgggcttccggctgctg
gtcgaacagggcccggccgccgtcgcggcgcgcccggatgcggcggaatag

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