Mannheimia varigena USDA-ARS-USMARC-1388: X875_11780
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Entry
X875_11780 CDS
T03029
Name
(GenBank) Acriflavine resistance protein
KO
K18138
multidrug efflux pump
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve01501
beta-Lactam resistance
mve01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
X875_11780
01503 Cationic antimicrobial peptide (CAMP) resistance
X875_11780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mve02000
]
X875_11780
01504 Antimicrobial resistance genes [BR:
mve01504
]
X875_11780
Transporters [BR:
mve02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
X875_11780
Antimicrobial resistance genes [BR:
mve01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
X875_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Macro
YkcB_C
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AHG79796
LinkDB
All DBs
Position
complement(1243311..1246478)
Genome browser
AA seq
1055 aa
AA seq
DB search
MKFTDIFIKRPVLAVCISLLITILGLQAIEKLQVREYPEMTVSIVTVSVNYSGADAGLMQ
ALVTSQLEEAVAQADNIDYMTSSSSPSTTTVTAKMKLNTDPNAALSDISAKVNAVRSNLP
RGIDDPSISVSTGSNDALMYIRFVSDELNTAQVTDYLNRVVKPQFFTVNGVSSVDVYGST
FGLRIWLDPDKMASNKLSGSAVLSALSANNLQTAAGNANGYYTVYKNKVLSTTPSVQELE
QVTVSTTSDGRTIKLKDIATVELDKSNDMARATVSGKEAVVLAVSVAATANSLTVAKDIY
PMFEQVVRNLPDSIQGDIVYDKTIAIDSSINEVIRTILEATVIVLVVIILFLGSLRAMIV
PVITIPISLIGALFLLQMFGFSINLLTLLALVLAIGLVVDDAIVVLENVERHVKEGKTPF
DAAIIGTREIALPVISMTITLAAVYSPMALMTGVTGTLFKEFALTLAGAVFISGIAALTL
SPMMSSRVLKEHKEGEESHFARFVHRSLDKMTSCYTNMLNAVMAVRGFMLFFAVLIFASL
PFLFTSLSSEVAPTEDRGFVVGISKGPSNTNLDYTEAALAPFTEEVSNVSEVSSVMTISG
FNGSNSALSIIALKDWNDRTRERAEISNEIAALGKKVVAMDVNAISFPEISTGENGLPFS
LVITTADSYEKLAVVASEFLKKAQASGQFFFANLDLKFDTATMNMKFDREKMGAYGVTMQ
QVSGTLGAFLSGAIITRVDIDSRAYPIVSQAVRNDRLNPEDLMKYYVTTASGESIPLGSF
VTMELTTSPSSLPRMSQLNSATIGGVVSGSIGDAVNWAKAELDRTLPTGYQYDFRGESRQ
FIQEGNAMAMTFALAVVIIYIVLAIQFESWRDPLVILVSVPLAVSGALLVMNIPSAMKGL
FMGIAAGTGSKDMMTFANSIWTAGYTLNIYSQVGLITLVGLITKHGILMCEVAKEEQLNH
GKSRYEAIVYAATIRLRPIMMTTAAMIAGLIPLLFAVGAGAIARFSMGMVIVAGLAIGTL
FTLFVLPVIYTFLGQEHKPLREFDEEKYFPTTKEA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttactgacatctttattaaacgccctgttttggccgtttgtattagcttactt
attacgattttaggcttacaagcgattgaaaaattgcaggtgcgtgaatatccggagatg
actgtttctattgtaacggtgagtgtaaactattcaggtgcagatgccggtttaatgcaa
gcccttgttacctcacagttagaagaagcggttgctcaagcggataatatcgactatatg
acgtcatcaagctcgccaagtacgacaacagttacggcgaaaatgaagttaaataccgat
ccgaatgcagcactttctgatatatcagccaaagtgaatgcggtacgttcaaacttaccg
agaggtattgatgacccttctatcagtgtttcgaccggttcgaacgatgcgttaatgtat
attcgatttgtgtctgatgaattaaatacggcacaagtaactgattatctaaatcgtgtg
gttaaaccgcagttctttaccgtaaatggggtatcaagtgttgatgtatatggctcaaca
ttcggtttacgtatttggttagatccagacaaaatggcgagtaataagctatcaggctca
gcggttttatcggcattaagtgctaataatttacaaactgcagccggtaatgctaacggc
tattatacggtgtataaaaacaaagttttatccactacgccttctgttcaggagctagaa
caagtaaccgtttcaacgacatcggatggtagaacaattaaactgaaagatattgctacc
gtagaactagataaatcgaacgatatggctcgagcaacggtaagtggtaaagaagcggtg
gttttagcggtttcagttgcagctacggcaaactcacttactgttgcaaaagatatttac
ccaatgtttgaacaggtagtgagaaacttaccggatagtatccaaggggatatcgtttac
gataaaacaattgcgattgatagctcaatcaatgaggttattcgtactattttagaagca
accgttattgtattggtggtgattatcctattcttaggctcgcttcgagcaatgattgtg
ccggttattaccattccgatttcacttatcggggcattattcttgcttcaaatgttcggt
ttctcaattaatcttctaactttacttgcgttagtattagcgattggcttagtggttgat
gatgcgatcgtggtacttgaaaatgtagaacgccacgttaaagagggtaaaacaccattt
gatgcagcaattattggtacgcgtgaaattgctttaccggtaatttcaatgacaattaca
ttagcagcagtatattccccaatggcattaatgacaggggtaacaggcacacttttcaaa
gagtttgctttaactcttgccggtgcggtatttatttcagggattgcggctcttacactt
tcgccgatgatgtctagccgagtgttgaaagagcataaagaaggtgaagagtctcacttt
gctcgctttgttcatcgttcattagacaagatgaccagctgttacaccaatatgctaaat
gcggtaatggcggtgcgtggttttatgctgttctttgcagtattgatttttgcaagtcta
ccgttcctatttacttcactttcaagtgaagttgccccaacagaagatcgtggctttgta
gtggggatctcaaaaggcccatctaacaccaacttagattatacagaagcagccttagct
ccgtttactgaggaagtatctaacgtctctgaagtttcatcggttatgacgatctcaggg
ttcaatggtagtaatagtgcattatcgattatcgcattaaaagattggaatgatcgtact
cgtgagcgtgcggaaatatcaaacgaaattgctgcactaggtaaaaaagtggttgcaatg
gatgttaatgcaatttctttccctgagatctcaacaggcgaaaatggcttaccgttttca
cttgtaattacaaccgcagacagctatgagaaattagccgtagttgcctcagagttcttg
aaaaaagcacaagcatcaggccaattcttctttgcaaacttagacctcaaatttgacaca
gcaacgatgaatatgaaattcgatcgtgaaaaaatgggtgcttatggtgtaacgatgcaa
caggttagtggcacattaggagcattcttatctggtgcaattattacccgtgttgatatt
gactctcgtgcttacccaattgtgtcgcaagcggtacgtaatgatcgtttaaatcctgaa
gatttaatgaaatactatgttacgacggcaagtggtgagtctattccgttaggttcattt
gtaacaatggaattaactacttcgccttcttcattgcctcgtatgagccagctaaattca
gcaaccattggtggcgtagtgtcaggctcaatcggcgatgctgtaaattgggcgaaagca
gaattagatcgtactttgccaacaggttatcagtacgactttagaggtgagtctcgccaa
tttattcaagaaggtaatgcaatggcaatgacatttgctcttgcggttgtgattatctat
attgtattggcaattcaatttgagtcttggcgtgatccgctggtaatcttagtttctgta
ccacttgcagtaagtggagccttgctagtaatgaacattccgtccgcaatgaaagggctg
tttatgggcattgcggcaggcacaggttctaaagatatgatgacatttgccaatagtatt
tggacggcgggttatacgctgaatatctactcgcaagtaggcttgattacgcttgttggc
ttaattactaaacacggtatcttgatgtgtgaagtggcaaaagaagagcagctcaatcac
ggcaaatcacgctatgaggcgattgtttatgcagcaaccattcgtttacgcccgattatg
atgacaactgcggcgatgattgcaggcttaattccgcttttattcgcagttggtgccggt
gcaattgcccgtttcagtatgggtatggtaattgtggcagggcttgcgattggtacgtta
tttaccctattcgtgctgcctgtgatctataccttcttaggtcaagaacacaaaccatta
cgtgagtttgatgaggaaaaatatttcccgacaacaaaggaagcgtaa
DBGET
integrated database retrieval system
