Mannheimia varigena USDA-ARS-USMARC-1388: X875_3630
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Entry
X875_3630 CDS
T03029
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve00300
Lysine biosynthesis
mve00550
Peptidoglycan biosynthesis
mve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
X875_3630
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X875_3630
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mve01011
]
X875_3630
Enzymes [BR:
mve01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
X875_3630
Peptidoglycan biosynthesis and degradation proteins [BR:
mve01011
]
Precursor biosynthesis
Amino acid ligase
X875_3630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AHG78983
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Position
complement(374471..375964)
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AA seq
497 aa
AA seq
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MKRLLPFLTELDAWVEELTELNQMTLDSRQVQKGDLFVALKGHQVDGRKFIEKAIEQGAS
LVLSEAETDQTEIELDPKFAKFNLDRTACCKVVSVPALPKLLSEIAGEFYGNPSQKLVLA
GITGTNGKTTTAQLLAQWRNLLGGKSAVMGTIGNGLYGKVQEALNTTGSAIEIQRNLADF
VELGADFCAMEVSSHGLAQFRAEALAFDVAMFTNLSRDHLDYHNTMEEYAEAKFRLFSEL
NTQAQVINTDDEIGAEWLKKLPNAVAVSTNPNFASQHRFVKATNVSFTLQGATIQFESSW
GNGELNSRLIGAFNVSNLLTAFAGLLALGLDINELVKTAPNLVGVAGRMECITAPNKPMV
IVDYAHTPDALEKALQAARLHCEGELYCIFGCGGDRDSGKRPLMAQIAEQLADKVIATDD
NPRTEDNQKIMADIVKGFAKPQQIINNREEAIKTAIAQAKDRDVILIAGKGHEDYQIIGT
EKLHFSDQETARKYLSE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttacttcctttcctcaccgagctagacgcttgggttgaagaattaactgaa
ctcaatcaaatgacactagacagccgccaagtgcaaaaaggcgatctgtttgtggcgtta
aaaggtcatcaagtggatggcagaaaatttatcgagaaagcgattgaacaaggggcaagc
cttgttttgagtgaagcagaaacggatcaaactgaaattgaactcgatccaaaatttgca
aaatttaacttagatcgcaccgcttgttgcaaggtggtgagcgtgcctgcattgccaaaa
ttactctctgaaatcgcaggcgaattttacggtaatccgtcacaaaaattagtgttggca
ggcattactggcacaaacggtaaaacgaccacggcacaattacttgcccaatggcgaaat
ttattgggcggtaaatcagcggtgatgggcactatcggcaacggcttatacggcaaagta
caagaagcgctaaataccaccggatctgccatcgaaattcagcgtaacctcgccgatttt
gtggaacttggagctgatttttgtgcgatggaagtcagctcgcacggtttagctcaattc
cgagctgaagccttagcgtttgatgtagcaatgttcaccaatttaagccgtgatcatttg
gactaccacaacacaatggaagagtacgccgaggcaaaattccgcctatttagcgagctc
aacacccaagcccaagtgattaacactgacgatgaaatcggggcagaatggttgaaaaaa
ttaccaaatgcggttgcagtaagcacaaatcctaatttcgccagccagcaccgtttcgtg
aaagccaccaacgtgagcttcaccttacaaggggcaacaattcaatttgaatcgagctgg
ggaaatggtgagctaaacagccgtttaatcggagcgtttaatgtcagtaacctgctaact
gcttttgcaggactgttggcactaggcttggatattaatgaattagtcaaaactgcccca
aatttagtaggcgttgccggtagaatggaatgtatcactgcaccaaacaaaccgatggtg
attgtggactacgcccacacaccagatgccttagaaaaagcgttacaagccgcacgactt
cattgcgagggtgaactctactgcatcttcggctgcggcggcgaccgtgattcaggcaaa
cgcccactaatggcacaaattgctgaacaattagccgataaagtgatcgcaacagacgat
aatccaagaactgaagataaccaaaaaattatggcggatattgttaaaggtttcgctaag
ccgcagcaaattatcaacaaccgtgaagaggcgattaaaaccgctattgcacaagccaaa
gatcgtgatgtgattttaatcgcaggtaaaggccacgaggattatcagattatcggcacg
gagaagttgcatttttcggatcaggaaacagcaagaaagtatttaagtgaatga
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