Mannheimia varigena USDA-ARS-USMARC-1296: X808_17540
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Entry
X808_17540 CDS
T03027
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi00540
Lipopolysaccharide biosynthesis
mvi01100
Metabolic pathways
Module
mvi_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
X808_17540
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mvi01005
]
X808_17540
Enzymes [BR:
mvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
X808_17540
Lipopolysaccharide biosynthesis proteins [BR:
mvi01005
]
Lipid A
X808_17540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AHG76274
UniProt:
W0QBL3
LinkDB
All DBs
Position
1867403..1868323
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AA seq
306 aa
AA seq
DB search
MIKQRTLKQAAKVTGIGLHSGKKVTLTLRPAPANTGVIYARTDLEPAVYFPAKADSIRDT
KLCTCMVNDDGVRISTVEHLSAAMSALGLDNVIVEVDAPEIPIMDGSSSPFIYLLLDAGI
EEQDAPKKFIRIKETVRVEEDDKWAELKPYNNGFKLNFTIDFEHPLISKNVRNYAMDFSA
ENFIQQLSRARTFTFMKDVEYLQSIGLALGGSLDNAIVLDDYRILNEDGLRFKDELVRHK
MLDSIGDLFMCGYNILGEFSAYKSGHGVNNKLLRAVLANKNAWELVTFEDKSQVPQGYQV
QQEIFI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaagaacattaaaacaagcagcaaaagtaacaggtattggcttgcatagt
ggtaaaaaagtaacgctaacgttacgtcctgccccagccaatacaggggttatttatgcc
cgtaccgatttagagcctgccgtttatttccctgcaaaggcagactctattcgtgataca
aaattatgtacatgtatggtaaatgatgacggcgtacgtatctcaactgtagagcatcta
agcgcagccatgtcagcattaggcttagacaatgttattgttgaagtagatgcgccagaa
attccaattatggacggtagctcaagcccattcatttatttattattagatgcaggcatt
gaagagcaagacgcgccaaagaaatttattcgcattaaagaaactgtacgagttgaagaa
gacgataaatgggctgaattaaagccatataataatggttttaaattaaatttcactatt
gattttgaacacccattaatctcaaaaaacgtaagaaactacgcaatggatttttctgcg
gagaactttattcaacagttaagtcgtgcgagaaccttcacattcatgaaagatgttgaa
taccttcaatctattggcttagccttaggtggaagtttagataatgctatcgtattagat
gattatcgcatcttaaatgaagatggtctacgttttaaagatgagctcgttcgccataaa
atgctagattcaattggcgatttatttatgtgtggctataatattcttggtgaatttagc
gcttataaatcaggccacggtgtaaataacaaattattgcgtgctgttcttgctaataaa
aatgcgtgggaacttgttacctttgaagataaatcacaagttcctcaaggttatcaagta
caacaagaaatttttatctaa
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