Mycolicibacterium vaccae: MYVA_5309
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Entry
MYVA_5309 CDS
T04356
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mvq
Mycolicibacterium vaccae
Pathway
mvq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYVA_5309 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvq03400
]
MYVA_5309 (nth)
Enzymes [BR:
mvq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MYVA_5309 (nth)
DNA repair and recombination proteins [BR:
mvq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MYVA_5309 (nth)
Prokaryotic type
MYVA_5309 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANI42357
LinkDB
All DBs
Position
complement(5537145..5537933)
Genome browser
AA seq
262 aa
AA seq
DB search
MSVKPADGAPKAKTGRKSDRKWDKETHLGLVRRARRMNRTLAKAFPHVYCELDFTDPLEL
TVATILSAQSTDKRVNLTTPALFKKYRTALDYAQADRTELEELIRPTGFYRNKASSLIGL
GQALVERFDGEVPKTLDELVTLPGVGRKTANVILGNAFDVPGITVDTHFGRLVRRWRWTA
EEDPVKVEHAVGELIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGIGPTD
PMIAAPLVKGPETEHLLALAGL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgaaaccggccgacggggcgccgaaggcgaagaccggccgaaaatcggaccgc
aaatgggacaaagaaacccacctcgggctggtccgccgcgcccgccggatgaaccgcacc
ctggccaaggcgtttccgcatgtgtactgcgaactggatttcaccgacccgctcgagctg
acggtcgcgaccatcctctccgcgcagagcaccgacaagcgggtcaacctcaccaccccg
gcgctgttcaagaagtaccgcaccgccctggactacgcgcaggccgaccgcaccgaactg
gaagagctgatccggcccaccggcttctaccgcaacaaggccagttcgctgatcgggctg
ggccaggccctggtcgaacggttcgacggggaggtccccaagaccctcgacgagctggtc
acgctgcccggggtggggcgcaagacagccaacgtgatcctcggcaacgcgttcgacgtc
cccggcatcaccgtcgacacccatttcggccggttggtgcggcggtggcgctggacggcc
gaggaagacccggtgaaggtcgagcacgccgtcggtgagctcatcgagcgcagcgagtgg
acgctgctcagccaccgggtgatcttccacggtcggcgcgtctgccatgcccgcaagccg
gcctgcggggtctgcgtgctcgccaaggactgtccgtcctacggcatcggccccaccgat
ccgatgatcgcggcgccgctggtcaaaggacccgagaccgaacacctgctggcgctggcc
gggctgtag
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integrated database retrieval system
