Mannheimia sp. USDA-ARS-USMARC-1261: X781_16470
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Entry
X781_16470 CDS
T03026
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvr03009
]
X781_16470
Enzymes [BR:
mvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
X781_16470
Ribosome biogenesis [BR:
mvr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X781_16470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_32
Methyltransf_15
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AHG73794
UniProt:
W0Q4F8
LinkDB
All DBs
Position
1680257..1681444
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AA seq
395 aa
AA seq
DB search
MLNQPNQLSCLHFERGDCTSCQWLEQSYQNQLTEKEADLKRLIFPFILQNETEILPLVRS
PISRFRNKAKMVVSGSVERPILGILKDQNDAQSGVDLTDCSLYPPSFSALFPILKDFIAR
AGLVPYNIAKKKGELKYILITESQFNQSLMIRFVVRSETKRALVERELPHLVEKLPKNSV
VSLNIQPQHAAVLEGETEIFLTEHKVIEEHFNGIPLFIRPQGFFQTNPFVASQLYLTARQ
WIENLPIQKCWDLFCGVGGFGLHCAKALQDKGVDVELTGIEISASAIASATKSAQRLGLE
KVTFASLDSAQFALNEAGSTPDLVIVNPPRRGIGKPLAEFLNDLGSPYLIYSSCNAQSMA
KDFAALTNYELNKVQLFDMFPHTSHYETLTFLIKK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatcagcctaatcaacttagttgcttacactttgagcgtggcgattgtacctct
tgccaatggcttgagcagtcttatcagaaccaattaacagagaaagaagccgacctcaag
cggttaatttttccttttattttgcaaaatgaaaccgaaatcttaccgcttgttcgctcg
ccgatttcccggtttcgcaataaagcgaaaatggtggtctccggtagtgtggaacgcccg
attctcggcattttaaaagatcaaaatgatgcacaaagtggtgtagatttaactgattgt
tctctctatccgccttcgttttcggctctttttccgattttaaaagattttatcgcccga
gccggtttagtaccttataacattgccaagaaaaaaggcgagctgaaatatattctgatt
accgaaagccaattcaatcaatcgctgatgatccgttttgtggtaagaagtgaaacaaag
cgagcgttagtcgaaagagagttacctcacttagtagaaaaactaccaaaaaattcggtc
gttagcctcaacattcaaccacaacacgcagccgtcttggaaggtgaaaccgagatattc
ctaacagagcataaagtcattgaagaacattttaacggtattccgttatttattcgtccg
caaggctttttccaaaccaacccttttgttgcaagccaactttatttgactgctcgacag
tggattgaaaacttaccgatacaaaaatgttgggatctgttctgcggtgtcggtggcttt
gggttacattgtgccaaagcattgcaagacaaaggtgttgatgtggaattaacgggcatt
gaaatttcggcttcggctattgccagtgcaacaaaatcagcccaaagattaggtttagaa
aaggtaacatttgcctcactggactccgcccaatttgcattaaatgaagcaggctcaaca
cctgatttagtgattgtgaacccacctcgacgtggtattggcaaacctttagcggaattt
ttaaatgatttaggctctccttatttgatctattcaagttgcaacgctcaatctatggct
aaagattttgcagccttaaccaattatgaattaaacaaagtgcagttgtttgatatgttc
cctcacacttcacattatgaaacactgacttttttaatcaaaaaataa
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