Microcystis viridis: myaer102_47350
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Entry
myaer102_47350 CDS
T06032
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mvz
Microcystis viridis
Pathway
mvz03030
DNA replication
mvz03410
Base excision repair
mvz03420
Nucleotide excision repair
mvz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
myaer102_47350
03410 Base excision repair
myaer102_47350
03420 Nucleotide excision repair
myaer102_47350
03430 Mismatch repair
myaer102_47350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvz03032
]
myaer102_47350
03400 DNA repair and recombination proteins [BR:
mvz03400
]
myaer102_47350
Enzymes [BR:
mvz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
myaer102_47350
DNA replication proteins [BR:
mvz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
myaer102_47350
DNA repair and recombination proteins [BR:
mvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
myaer102_47350
NER (nucleotide excision repair)
GGR (global genome repair) factors
myaer102_47350
MMR (mismatch excision repair)
DNA ligase
myaer102_47350
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
myaer102_47350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
MctB
DUF7898
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BBH42096
LinkDB
All DBs
Position
5019174..5021183
Genome browser
AA seq
669 aa
AA seq
DB search
MTIPLEIQQRCQQLKTELQRASYAYYVLDDPFIPDSVYDQLYRELEDLEKRYPQLITSDS
PTQRVGDKISSQFVSVRHNIPLYSLENAFNLEELNKWGNRWQRYVNETQDTEYVCELKID
GSALALTYENGFLVRGVTRGDGVTGEDITPNVRTIRSIPLRLNIDNHPAIVEVRGEAFFP
LDTFDKINQEREEKGESLFANPRNAAAGTLRQLDPKIVDKRRLQFFAYTLHLDDNHITTQ
WQSLDRLETMGFLVNPHRQLCPSLQEVAQYYQDWQEKRHQLAYMTDGVVVKINDLQRQNR
LGFTQKFPRWAIALKYPAEEVPTVVKDIIVNVGRTGAVTPMAVMEPVQVAGTTVQRATLH
NSDRVAELDIRIGDTVIIRKAGEIIPEVVRILPELRPPQTLPFQMPTNCPECQSPLVRPV
GEAVTRCVNSSCPAILRGSVVHWASRDALDIRGLGEKVVILLIEQGLVTAISDLYSLEKT
EIAKLDRMGEKSALNLITAMAQSKNQSWSRVLYGLGIRYVGSVNAKILAESFRTVEELAN
ASVTNLASVYGIGEEIAQSVYDWFRIEANRDLVAKLQAAGLQFAAAAKTTTTKATLAGKT
FVITGTLPTLKREEAKELIEKAGGKVTGSVSKKTDYLVLGEAAGSKLEKALELGITQLTE
AQLLELIKA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgactatccccttagaaatccaacaacgttgccaacaactaaaaacagaactacaaaga
gccagttatgcttattatgttcttgatgatccttttatacccgatagcgtttatgatcaa
ctttatcgggaattagaagacctagaaaagcgttatccccaattaatcacctccgatagt
cccacccaaagagtcggggataaaatctctagtcaattcgtttctgtccgtcataatatt
cccctgtatagtctcgaaaatgcctttaacctcgaagaattaaataaatggggcaaccgt
tggcaaagatatgtaaatgaaacccaagacacggaatatgtgtgtgaattaaaaatcgat
ggttccgcgttagctttaacctacgaaaacggctttttagtcagaggtgttactagaggg
gatggagtcactggcgaagatattacccccaatgtgcggacaattcgctctattccttta
cgcttaaatatagataatcacccagcaattgtggaagtgcgcggcgaagcttttttcccc
ctcgataccttcgataaaatcaatcaagaaagagaagaaaagggggaatctctctttgct
aatccccgcaatgcagcagcaggaaccctacgacaattagatccgaaaatagttgataaa
agacgcttacaattttttgcctataccctgcatttagacgataaccatatcactactcaa
tggcaatccttagatagattagaaacgatgggatttctggttaatccccaccgtcaactc
tgtccatccctgcaagaagtggcgcaatactatcaagattggcaagaaaaacgtcatcaa
ttagcctacatgaccgatggtgtcgtagtcaaaatcaacgatttacagcgacaaaatcgg
ttaggattcactcaaaaattcccccggtgggcaatcgctttaaaatatcccgccgaagaa
gtccccacggtagttaaagatattatcgtcaacgtgggacgcaccggtgcggttacaccc
atggcggtgatggaaccagtacaggtagcaggaaccaccgtacaaagggctactttacat
aatagcgatcgagtggccgaattagatatccgcatcggtgacacggtaattatccgcaaa
gcgggggaaattatcccagaagtggtgagaatcctgcccgaattgcgtcctccccagact
ttacccttccagatgcccactaattgccctgaatgtcaatctcccctagttcgtccggtg
ggggaagcggtgacgcgctgtgtcaatagttcctgtccggcgattttgcggggaagtgtg
gtacattgggccagtcgcgatgccctcgatattcggggattaggggaaaaagtggtgatt
ttgctgattgaacagggattagttaccgccatttctgacctctatagcctcgaaaaaacg
gaaattgccaaattagaccgaatgggcgagaaatcagccttaaatttgattacagctatg
gctcagagcaaaaatcaaagctggtcgagagtactttatgggctaggaattcgctatgtg
ggcagcgttaacgccaaaattctcgccgaaagttttcggactgtggaggagttagctaac
gccagcgtgactaatttagcctctgtctatggtatcggtgaagaaatcgctcaatcggtc
tatgattggtttagaatcgaggctaatcgggatttagtcgctaaattacaggcagcgggt
ttacaatttgccgcagcagcaaaaaccaccaccactaaagccaccttagcagggaaaacc
tttgtgattactggcactttaccaactctcaaacgggaggaggccaaagaattaatcgaa
aaagctggggggaaagtgacgggttctgtcagcaaaaaaaccgattatttagtgctagga
gaagcggcgggttctaagctagaaaaagccctagaattgggcattactcagctaaccgaa
gcacaattactcgaattaatcaaggcttaa
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