Moellerella wisconsensis: MNY66_00930
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Entry
MNY66_00930 CDS
T07971
Symbol
ligB
Name
(GenBank) NAD-dependent DNA ligase LigB
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mwi
Moellerella wisconsensis
Pathway
mwi03030
DNA replication
mwi03410
Base excision repair
mwi03420
Nucleotide excision repair
mwi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MNY66_00930 (ligB)
03410 Base excision repair
MNY66_00930 (ligB)
03420 Nucleotide excision repair
MNY66_00930 (ligB)
03430 Mismatch repair
MNY66_00930 (ligB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mwi03032
]
MNY66_00930 (ligB)
03400 DNA repair and recombination proteins [BR:
mwi03400
]
MNY66_00930 (ligB)
Enzymes [BR:
mwi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MNY66_00930 (ligB)
DNA replication proteins [BR:
mwi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MNY66_00930 (ligB)
DNA repair and recombination proteins [BR:
mwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MNY66_00930 (ligB)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MNY66_00930 (ligB)
MMR (mismatch excision repair)
DNA ligase
MNY66_00930 (ligB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MNY66_00930 (ligB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_DNA_ligase
DNA_ligase_aden
RNA_ligase
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
UNH42608
LinkDB
All DBs
Position
224993..226822
Genome browser
AA seq
609 aa
AA seq
DB search
MRINIGFLLSWLMIKRLHPQSVFLIAVSGLSLILYLLFHTDSLAESPKEDKNCPNWSVEK
FNTEIIHLNQQLSEWDHAYYQQGHGVVDDEVYDQLALTLGQWQNCIHKPLQLTGDYLSHA
TNNIMGNLEDRPQTVTKNDFRHKVSHPVIHSGLKKLSTEQIKGWLASREQVWLQPKIDGV
AVTLVYEYGELTGLISRGDGVKGENWRYKADFIPAIPKRIPSASAFLVLQGELFWRLEQH
IQQDAGGLNMRSKMAGWMMRKGNPTATEENIGLFIWGWPDGPEDMPTQLKKLAELGFTLS
TQHTHSLDNYIHAENLRSHYYQQPMPFATDGVVLKQYPIPVSQAWQVGNNSWSVGWKYPL
RLQLTEIKSLRLSIGRTGRLTIIAHVYPVIIDGKKVQRVNLGTYRHWLNQDVLVGDKVQI
SLAGHGIPKLEQVVWRLQKRILPDFLPVQHYDTSTCFTYSVDCHQQFMARLIWLGKHLGM
KGINIRAWESLIDAGKLRTLTDWLLLHRQDINQVTSIGLAKAEIISTQFEQAKQKAFYFW
LKGLSVPLPNTKLQQITSWHQLSHGALISRLSVKQKTQLNKFLAIPEIIQIAEQLQNSNI
EGFSLRDVR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaatatcggatttttattaagttggttgatgattaagcgacttcatccacag
agtgtatttctcatcgcagtgagcggtttgtctttaatattatatctattatttcacacc
gactccctcgctgaatcaccaaaagaagataaaaattgtccaaactggtcagtcgaaaaa
ttcaatactgaaattatccatttaaaccagcaattatctgaatgggatcatgcttattat
caacaagggcatggagtggttgatgatgaagtttatgatcagttagcgttaaccttagga
caatggcaaaactgtatccataaaccgctacaactaacgggagattatttatctcatgcc
actaacaacatcatgggaaacttagaagatagaccccaaactgtgaccaagaatgatttt
aggcataaagtatcacatccagttattcacagtggtttaaaaaagctatcaacagaacaa
ataaaaggatggttagcatcacgagagcaggtatggctacagcctaagattgatggtgtt
gctgtgactttggtgtatgaatatggtgagttaacgggattaatcagccgtggagatgga
gtgaaaggtgaaaattggcgatataaagccgattttatcccggctatccctaaaagaatt
ccatcggcttctgcctttctggtactgcaaggtgagttattttggcgcttagaacagcat
atccaacaggatgctgggggattaaatatgcgcagtaaaatggcaggttggatgatgcgt
aaaggaaatccaactgctaccgaagaaaatattggattatttatttggggctggcctgat
ggaccggaagatatgcctacccagttaaagaaattagccgaattaggatttacgttaagc
actcagcatacacatagcctcgataattatattcatgctgaaaacttacgaagccattat
tatcagcaacctatgccattcgcgaccgatggggtggtcttaaaacagtatcctattccg
gtgagtcaggcgtggcaggtgggtaataatagctggtctgttggatggaaatatccattg
cgtttgcaattgacagagattaaatcgttacgcttgagtattggtagaaccgggcgttta
acaattattgctcatgtttatccggtgattattgatggtaaaaaagttcagcgagttaat
ctaggaacgtatcgtcattggttaaatcaagatgtgttagtgggcgataaggttcaaata
agtttagctgggcacggaattcctaaattagaacaggttgtgtggcgcttacaaaaacgt
atattgccagattttttacccgtacagcattatgatacatcgacttgctttacctattca
gttgattgccatcagcaatttatggctcgtttaatctggttaggtaaacatttaggcatg
aaaggaataaatataagggcttgggaaagccttatagatgcgggtaaattacgtacacta
acggattggcttttattgcataggcaagatattaatcaggttacatcaatcggtttagca
aaagcagaaattattagcactcagtttgaacaggcaaagcaaaaagcattctatttttgg
ttaaaaggtttatcggtaccactgcctaacacaaaattgcagcaaataacgtcatggcat
caattaagtcatggtgctttgatttccagattatcagttaagcaaaaaactcagttgaat
aaatttttagcaatcccggagataatccaaattgcagagcagttacagaacagtaatatt
gaaggattctcattaagagatgttagataa
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integrated database retrieval system
