Moritella yayanosii: MORIYA_4321
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Entry
MORIYA_4321 CDS
T05564
Symbol
ligA
Name
(GenBank) DNA ligase, NAD(+)-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mya
Moritella yayanosii
Pathway
mya03030
DNA replication
mya03410
Base excision repair
mya03420
Nucleotide excision repair
mya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MORIYA_4321 (ligA)
03410 Base excision repair
MORIYA_4321 (ligA)
03420 Nucleotide excision repair
MORIYA_4321 (ligA)
03430 Mismatch repair
MORIYA_4321 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mya03032
]
MORIYA_4321 (ligA)
03400 DNA repair and recombination proteins [BR:
mya03400
]
MORIYA_4321 (ligA)
Enzymes [BR:
mya01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MORIYA_4321 (ligA)
DNA replication proteins [BR:
mya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MORIYA_4321 (ligA)
DNA repair and recombination proteins [BR:
mya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MORIYA_4321 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MORIYA_4321 (ligA)
MMR (mismatch excision repair)
DNA ligase
MORIYA_4321 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MORIYA_4321 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
DZR_2
Motif
Other DBs
NCBI-ProteinID:
SQD80773
UniProt:
A0A330LVR9
LinkDB
All DBs
Position
MORIYA:4411551..4413578
Genome browser
AA seq
675 aa
AA seq
DB search
MTEQVKQIQTLTLQLEEYNHQYYVLDNPTVPDAEYDRLLRELKQLETEYPELALATSPTQ
KVGGEALTGFSQIQHEMPMLSLDNVFSAEELLAFEKRLQDRLLTKTEIKFSCEPKLDGLA
VSILYEKGIFVRAATRGDGQIGEDISENVKTIKSIPLRLRGDDFPERLEVRGEVFMPKAG
FERLNVNAKKKGEKTFVNPRNAAAGSLRQLDPKIAASRPLAFNAYSLGVVEGEVEGKGLS
NSHAENLQKLKLWGIPVCADVTVAMGYQGCLDFYQQIGERRDSLSYDIDGVVYKVDDLTL
QKTLGFVARAPRWATSHKFPAQEEITTLLDVEFQVGRTGAITPVARLEPVFVGGVTVSNA
TLHNSDEIARLGIKIKDQVIIRRAGDVIPQVARVMLERRPDDAQDIVFPATCPVCNSEVE
RIEGEATVRCTAGLYCGAQRKEAIKHFASRKALNVDGLGDKLVEQLVDADLIKTPADLFS
VTFGKLTLLDRMGPKKATNLLEALKAAKHTTLAKFLYSLGIREVGEATAANLANDLLTLD
AIKQASVERLILISDVGDIVAKHIYYFFREAHNLDVIDQLIEAGMSWDDVAVKEASQQPL
LGTIYVITGTLVNISRADAKTRLQDLGAKVAGSVSKKTTALVAGPAAGSKLTKAQELGID
ILTEDDLLALLVAHS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaagtaaaacagattcaaaccttaacactgcaacttgaagagtataatcac
caatattacgtgttagataacccgaccgtaccggatgcggaatatgaccgtttgttacgt
gaactaaaacagctcgaaaccgaatatcctgaacttgcattagccacatcaccaacccaa
aaagtgggtggtgaagcgttaactggatttagccagattcagcacgaaatgccgatgtta
tcattggataatgtgttctctgcagaagagctattggcatttgaaaagcgtctacaagat
cgcttattgactaaaactgagatcaagtttagctgtgagccaaagctagatggtcttgcc
gtgagcattctgtatgaaaaaggcatttttgtccgcgccgcaacccgtggtgatggtcag
ataggcgaagatatttctgaaaatgtaaaaactattaaatcaattccactacgtttacgt
ggcgatgatttccctgagcgcttagaagtacgtggtgaagtgttcatgccgaaagcgggt
tttgagcgattaaatgtgaatgctaaaaagaaaggtgagaagacttttgttaacccgcgt
aatgccgctgcaggtagtttacgtcagcttgatcctaagattgcggcaagccgcccgtta
gcgtttaatgcctattcattaggtgtcgtggaaggtgaggttgaaggtaaggggttatct
aattctcacgcagaaaatttacagaaattgaagttatggggtatccctgtttgtgcggat
gtcactgttgctatgggttaccaaggttgcttagacttctatcaacagattggtgaacgt
cgtgattcattgtcgtatgacattgatggtgtagtgtataaagtggatgatttaacccta
cagaaaaccctgggttttgttgcgcgtgcaccacgttgggcaacgtcacataagtttcct
gcccaagaagagatcaccacattactcgatgttgaattccaagttggtcgtaccggcgcg
attacgcccgtcgcccgtttagaaccagtgtttgttggtggtgtgacagtgagtaatgcc
acgctacataattcagatgaaattgcccgtttaggcattaaaattaaagatcaagtgatc
attcgtcgtgccggtgacgtgatcccgcaggtcgctcgcgtgatgttagagcgccgtccg
gatgatgcccaagatatcgtattcccggctacgtgcccagtatgtaactctgaagtagag
cgtatcgaaggtgaagcaacagtgcgttgtaccgcgggtttgtattgtggtgcacagcgt
aaagaagcaattaaacattttgcatcgcgtaaagcgctaaacgttgatggtttgggtgac
aagcttgttgagcaattggttgatgcggatttaattaaaaccccagctgacctatttagc
gtaacgtttggtaagttaacgctgctcgatcgtatgggtccaaagaaagccaccaactta
cttgaagctttaaaagcagcgaagcatactacgctagccaagttcttatattcactgggt
atccgtgaagtaggcgaggcgacagcagcgaacttagccaatgacttgttaaccttagat
gcaattaaacaagcctctgtagagcgtttaattctgatttcagatgtcggtgatattgtg
gctaagcacatttactacttcttccgtgaagcgcataaccttgacgtgattgaccagcta
attgaagcgggcatgagctgggacgatgttgccgttaaagaagccagccaacagccgttg
ttaggcactatttatgttatcaccggcacgttagtgaatatttctcgtgccgatgcgaaa
acacggttacaagatttaggcgcaaaagtggcgggcagtgtgtcgaagaaaaccacggcg
ttagtggcgggtcctgctgcaggctctaagctcactaaagcgcaagagttaggtatcgat
attctgaccgaagatgatttactggcgctcttggttgcacatagctag
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