Myotis brandtii (Brandt's bat): 102253219
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Entry
102253219 CDS
T02920
Symbol
KDM2B
Name
(RefSeq) lysine demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102253219 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myb03000
]
102253219 (KDM2B)
04121 Ubiquitin system [BR:
myb04121
]
102253219 (KDM2B)
03036 Chromosome and associated proteins [BR:
myb03036
]
102253219 (KDM2B)
Enzymes [BR:
myb01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102253219 (KDM2B)
Transcription factors [BR:
myb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102253219 (KDM2B)
Ubiquitin system [BR:
myb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102253219 (KDM2B)
Chromosome and associated proteins [BR:
myb03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102253219 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102253219 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
102253219
NCBI-ProteinID:
XP_014402526
LinkDB
All DBs
Position
Un
AA seq
1379 aa
AA seq
DB search
MASKDAGGECPVQGAGGHWGCGPSQDPDFQHLWHLRKVARVAVVGCRGRAASAPVRAGLL
VRDDPPGPPVTSRALWLGSPQRPIDRQRYDENEDVSDVEEIVSVRGFSLEEKLRSQLYQG
DFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVM
DVNTQKGTEMSMSQFVRYYETPEAERDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDN
MWPQHLKEKQMEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIF
WLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVD
SLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLT
QEYQRESMLIDTPRKPSIDGFSSDSWLDMEEESCEQQPQEEEKEEEEEEEGADKVPKPPA
DGPASPTSIPSEDQEPPGKKPKAPALRFLKRTLSNESEESVKSTTMPIDDPKTPTGSPTA
EVPAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDP
SLAITGVPVVTWPKKTPKNRAIGRPKGKLGPASAVKLAANRATAGARRRRTRCRKCEACL
RTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGK
FNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGF
KYASNLPGSLLKEQKMNRDNKEGQESAKRRSECEEAPRRRSDEHPKKVPPDSILRRKSDD
VHLRRKRKYEKPQEPSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLK
PGKEDKLFRKKRRSWKNAEDRMALGNKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTA
GPSTESAEGHDEKKKVKMRRKRRLPNKELSKELSKELNQEIQKTESSLANENHQPIKSEP
ESENEEPKRPVSLCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCMQ
MERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCC
DKRLWTRIDLNHCRSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLS
GCSWIAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVE
LRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSD
CNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaagacgcaggaggggaatgccctgtgcagggcgcaggcggacactggggg
tgcggcccctctcaggatcccgattttcagcatctttggcatttgcgcaaagttgctcgg
gtggcggtggtggggtgcagggggcgcgcggcttctgcacctgttcgagctggcctcttg
gtgagagacgaccccccaggacccccagtaacgtcccgggctctctggcttgggtccccg
cagcgcccgattgaccgccagagatacgacgagaacgaagacgtgtcggacgtggaggag
atcgttagtgtccgcggcttcagcttggaggagaagctgcgcagccagctgtaccagggg
gacttcgtgcacgccatggagggcaaagatttcaactatgagtacgtgcagagagaagct
ctcagggttcccttgatatttcgagaaaaggatggactgggaattaagatgcctgaccct
gacttcacagtccgagatgtcaaactcctagtgggcagccggcggctggtggacgtgatg
gatgtgaacactcagaagggcacagagatgagcatgtcccagtttgtgcgatactacgag
acacccgaggctgagcgggacaagctgtacaacgtcatcagcctggagttcagccacacc
aagctggagcacctggtcaagcgtcccactgtggtagacttggtggactgggtggacaac
atgtggccgcagcacttgaaggagaagcagatggaagccacaaacgccattgcagagatg
aagtacccgaaagtgaagaagtactgtctgatgagcgtgaaaggttgtttcactgacttc
cacatcgactttggaggcacttccgtttggtaccatgttttccggggtgggaagatcttt
tggctgattcctccaaccctgcacaacttggcgctgtacgaggagtgggtgctgtcaggc
aaacagagtgacatcttcctgggagaccgtgtggagcgctgccaaagaattgagctgaaa
cagggctacacgtttttcatcccttccggctggatccatgcagtctacacccctgtagac
tctctggtattcggtggaaacatcctgcacagctttaacgtgcccatgcagctgcggatt
tatgagatcgaggacagaacacgggtgcagcccaaattccgttaccccttctactatgag
atgtgctggtatgtcttggagagatacgtgtactgtgtgacccagaggtcctacctcact
caggaataccagagagaatcaatgctgattgataccccaagaaagcccagtatagacggc
ttctcatctgattcctggctggacatggaggaggagtcttgtgagcagcagccccaggag
gaggagaaggaggaggaggaggaagaagagggtgcagataaggtgcccaagccacctgcc
gatggccctgcctcacccaccagcatcccctctgaggaccaggagccccccgggaagaag
cccaaagcacctgccctgcggttcctcaaaaggactttgtctaatgagtcagaggaaagc
gtcaagtccacgacgatgcccatagacgaccctaagacgcccactggctctcccaccgcc
gaggtccctgccaaatggacccacctcaccgagtttgaactgaagggcctgaaagctctg
gtggagaaacttgaatccctcccagaaaacaagaagtgtgtccccgagggcatcgaggac
ccccaggcgctcctggagggtgtgaagaatgtcctgaaggagcacgctgacgatgacccc
agtctggccatcactggggtccccgtagtcacctggccaaagaagactccaaagaaccgg
gccatagggaggcccaaagggaagctgggccccgcctccgcggtgaagttggctgccaac
cgggccacagcgggagctcgccggcgccggacgcgatgccgcaagtgcgaggcctgcctg
cggaccgagtgcggcgagtgccacttctgcaaggacatgaagaagttcgggggccccggg
cggatgaagcagagctgcatcatgcggcagtgcatcgcgccagtgctaccccacaccgcc
gtgtgcctagtgtgtggcgaggcggggaaggaagacacggtggaagaggaagaaggcaag
tttaacctcatgctcatggagtgctccatctgcaacgaaatcatccaccctggatgcctt
aagattaaggagtcagagggcgtcgtcaacgatgagcttccaaactgctgggagtgtccg
aagtgtaaccacgccggcaagaccgggaaagcctacaagcaaaagcgtggccctggcttc
aagtacgcctccaacctgcccggctccctgctcaaggagcagaagatgaaccgggacaac
aaggaaggccaggagtcggccaagcggaggagcgagtgtgaggaggcgccccggcgccgg
tcggatgagcaccccaagaaggtgcccccagacagcatcctgcgccgaaagtcagacgat
gtgcacctgaggaggaagcggaaatacgagaagccccaagagccgagtggacgcaagcga
gcctcgactcttcagacgtcccctggttcctcctctcacctgtcgccgaggccccctcta
ggcagcagcctcagcccttggtggagatccagcctcacctacttccagcagcagctgaaa
cctggcaaagaagataagcttttcaggaaaaagcggcggtcctggaagaatgccgaggac
cggatggctctaggcaacaagcctctccggcgcttcaagcaggaaccggaggacgacctg
cccgaggcgccccccaagaccagggagagcgaccattcccgctccagctcccccacagcc
gggcccagcaccgagagcgcggagggtcacgacgagaagaagaaggtgaaaatgcgccgg
aaacggcggctccccaacaaggagctgagcaaggagctgagcaaggagctcaatcaggag
atccagaagacggagagcagcctggccaatgagaaccaccagcccattaagtcggagcct
gagagtgaaaacgaggagcccaagcggcccgtgagcctctgcgagcgcccccatcgcttc
agcaaagggctcaacggcaccccccgggaactgcgacaccagctggggcccggcctgcgc
agcccaccccgagtcatctcccggccccctccttccgtgtccccgcccaagtgcatgcag
atggagcgacacgtgatccggccgccgcccatcagccccccacccgactcgctgcccctg
gacgatggggcggcccacgtcatgcacagggaggtgtggatggccgtcttcagctatctc
agccaccaagacctgtgtgtctgcatgcgggtctgcaggacctggaaccgctggtgctgt
gataagcggttatggacccgcatcgacctgaaccactgcaggtccatcacgcccctgatg
ctgagcggcatcatccggcgccagcccgtctccctggacctcagctggaccaatatctcc
aagaaacagctgagctggctcatcaaccgtttgccagggctccgagacttggtgctgtca
ggctgctcatggatcgcggtctcggccctctgtacctccagctgtccgttgctccggacc
ctggatgtccagtgggtagaagggctaaaggatgcccagatgcgggatctcctgtctccg
cccacagataacaggccaggtcagatggacaatcggagcaagctccgaaacatcgtggag
ctgcgtctagcaggcctggacatcaccgacgcctccctgcggctcatcatccgccacatg
cccctgctctccaagctccaccttagttactgtaaccatgttactgaccagtccatcaac
ctgctcactgcagtgggcaccaccacccgggactccttaacagaaatcaacttgtcagac
tgcaataaggtcactgaccaatgcctgtccttcttcaaacgctgtggaaatatctgtcat
attgacctgaggtactgcaagcaagtcaccaaggaaggctgtgagcagttcatagctgaa
atgtctgtgagtgtccagtttgggcaagtggaagaaaaactcctgcaaaaactgagttag
DBGET
integrated database retrieval system
