Myotis davidii (David's myotis): 102762748
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Entry
102762748 CDS
T02992
Symbol
SMG6
Name
(RefSeq) SMG6, nonsense mediated mRNA decay factor
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
myd
Myotis davidii (David's myotis)
Pathway
myd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102762748 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myd03019
]
102762748 (SMG6)
03032 DNA replication proteins [BR:
myd03032
]
102762748 (SMG6)
Messenger RNA biogenesis [BR:
myd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102762748 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
102762748 (SMG6)
DNA replication proteins [BR:
myd03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
102762748 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
102762748
NCBI-ProteinID:
XP_006768163
UniProt:
L5LLU6
LinkDB
All DBs
Position
Un
AA seq
1382 aa
AA seq
DB search
MKEPRQRKDNRRPDLEIYKPGLSRLRNKPKIKEPSGSDEFKDEIVNDKDSSAVGNGTQLI
KDVCKELDNQQQNGPVDPENIQAQESSPRIAGQEDRSLRIIKKTKKPDMQIYQPGRRMQT
LTKESTSRMDEEEILNQVEQLKVEEDECREQMKEEVVNKPDKDEIQKSLNCDRVRAAKGE
KGKRIEKGEGMKKVNEDPAQGKPGSAKRYSRSDKRRNRYRTCSTSSAGSNNSAEGSGLAD
NGCRRRRQDRTKLRSRLKKQVSMSSTDSLDEDRIDESDGPRRSSERKKHLERNCSGRGEG
EQKSNGKENRGTLRVTFDAETMNKDSPIVRPAREDVDRLKPDKGLSSGGKGSEKQESKNL
KQELRGRGRGILILPAHTNLTVNSSGSPESTPLGPRLLFGSGSKGSRSWGRGGTTRRLWD
PNNPDQKPALKSQTPQLHFLDTDDEVSPTSWGDSRQAQASYYKFQNSDNPYYYPRTPGPA
SQYPYTGYSPLQYPVGPTNGVYPGPYYPGYPTPSGQYVCSPLPANTMSPEEMEQHMRNMQ
QQELHRLLRVADNQELQLSNLLSRDRISPEGLEKMAQLRAELLQLYERCILLDIEFSDNQ
NVDQILWKNAFYQVIEKFRQLLKDPNVDNPEQIRNRLLELLDEGSDFFDSLLQKLQVTYK
FKLEDYMDGLAIRSKPLRKTVKYALISAQRCMICQGDIARYREQANDTTNYGKARSWYLK
AQHIAPKNGRPYNQLALLAVYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKA
EQMEKKQHEESELNPDQWRKGKKSTFRHVGDDTTRLEIWIHPSNPRSSQGTESGKDSEQE
NGLGSLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPVGST
RMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAIALGLAMFSLLVRRCTHLLKESAKAQ
PSSPEDEDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSQVAVDV
WSMLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTS
DKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDTMGKEMGSQEGKQLED
EEEDVVIEDFEEDSEAEGSGGEDDIKELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMR
QMELEIRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAG
GYARVVQEKARKSIEFLERRFESRDSCLRALTSRGNELESIAFRSEDITGQLGNNDDLIL
SCCLHYCKDKAKDFMPTNKEEPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQ
VG
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcccaggcaacgcaaagataatagacgccctgatctggaaatctataagcct
ggtctttcacgactaaggaacaaacctaaaatcaaagaaccctctgggagtgatgaattt
aaggatgaaattgttaatgacaaagattcttcagctgttggaaatggtacacagctcatt
aaagatgtctgcaaggaactcgacaaccaacagcaaaatggtcctgtagacccagaaaat
attcaggcacaggagtcctctcctagaattgctggacaagaggatcgaagtctaagaatt
atcaagaaaacaaagaaacctgacatgcagatctatcagcctggaaggcgtatgcagact
cttaccaaagaatctactagcaggatggatgaggaagaaatcctcaaccaggtagaacaa
ctgaaagtagaggaagatgaatgtagggaacaaatgaaagaggaagttgtgaataaacca
gacaaagatgagatacaaaagagcctaaattgtgacagagtaagggctgcaaagggagaa
aaaggaaagaggattgaaaaaggggaggggatgaagaaagtgaatgaagacccagcacag
gggaagcctggttctgcaaagcgctattcccgctcagacaaacgaaggaaccgctaccgc
acctgcagtaccagctcagctggtagcaacaacagtgctgaggggtctggcctggctgat
aatggatgtcgccgccgccgccaggataggaccaagttgaggtcacgactgaagaagcaa
gtgtctatgtcttcaactgactccttagatgaggacagaattgatgagtctgatgggccc
aggaggagctcagaaaggaagaaacatttagaaagaaactgttctggccgtggggaggga
gagcagaaaagcaacggtaaagaaaatcgaggcactcttcgtgtcacttttgatgcagaa
accatgaacaaagattcccccatagtgaggccagccagagaggatgtggataggttaaag
cctgataaaggcttgagcagtgggggcaaaggctctgagaagcaggagtccaaaaacctg
aaacaagaacttcggggtcgtggccgtggcattctgattctgcctgcccataccaaccta
actgtcaattcatctggttctccagagtctacacctttgggacctcggctattatttgga
tctggtagtaagggatctcggagttggggccgaggaggcaccactcgacgattgtgggac
ccaaacaatcctgatcagaaacctgctctaaagagccagacaccccagctacatttcttg
gacactgatgatgaagtcagccctacatcttggggtgactcacgccaggcccaagcatct
tactataagtttcaaaactctgacaacccttattactacccccggacaccaggccctgcc
tcccagtatccttatacaggctatagccctctgcagtacccagtgggccctacaaatggt
gtgtacccaggaccttactacccaggctacccgactccatcaggacaatatgtgtgtagt
cctctccctgccaacaccatgagtcctgaggagatggagcagcacatgaggaacatgcag
caacaagaactacataggcttctccgggtggctgataaccaggaactgcagctcagcaac
ctgctctccagggaccgcatcagtcctgagggcctggaaaagatggctcagcttagagct
gaactgctgcagctatatgagcgctgtattctattagatattgagttctctgataatcag
aatgtggatcagatcctgtggaagaatgctttctatcaggtgattgagaagttcaggcag
cttctcaaggatccgaatgttgataacccagaacagattcggaacagactgttggaactc
ttggatgagggtagtgacttctttgatagtttgcttcaaaagctgcaggttacttacaag
ttcaaactggaggactacatggatggtcttgccattcgtagcaagccattacgcaagaca
gtaaaatatgccttgatcagtgcccagcgatgtatgatttgtcaaggagatattgctagg
tatcgggaacaagccaatgacacaacaaactacgggaaagcacgcagttggtacctgaag
gcccagcacattgctcccaagaatgggcgcccctataaccagctggctctgctggcagtg
tatacgaggaggaagcttgatgctgtgtattactatatgcgcagtttagctgccagcaac
cctatcctgactgccaaggagagtctcatgagcttgtttgaagagaccaaacgaaaggca
gaacagatggaaaaaaagcaacacgaggaatcggaactgaaccctgaccagtggcggaaa
ggaaagaaatctactttccggcatgttggagatgacactactcgcctggagatctggatt
catccatccaatccccggtcctctcagggcactgagtctgggaaggattctgagcaggag
aatgggctgggcagcctgagccccagtgatctgaacaaaaggttcatcctcagttttctc
catgcccatgggaagctgtttacccggattgggatggagacattccctgcagtggctgag
aaggtgctcaaggagttccaggtattgctgcagcatagtccctctcctgttggaagtact
cgcatgctgcagcttatgaccatcaacatgtttgctgtacacaactcccagttgaaagat
tgcttctcggaggagtgtcgctctgtgatccaggagcaagccatagccctgggtttggcc
atgttttctctcttggtgcggcgctgcacccacttacttaaggagtctgccaaagctcag
ccatcctctcctgaggatgaggatgaccaagatgacatcaaggtttcttccttcgttccg
gacctgaaggaactgctccccagtgtgaaagtctggtcagactggatgctcggctaccca
gacacctggaatcctccacccacatccctggatctgccctcacaggttgctgtggatgtg
tggtcgatgctggctgatttctgtaacatattgactgcggtgaatcagtctgaggtgcca
ctgtacaaggacccggacgatgacctcacccttcttattctggaagaggatcggcttctc
tcgggctttgtccccttgctggctgcccctcaggatccctgctacgtggagaaaacctcg
gataaggttattgcagccgactgcaaaagggtcacagtgctgaagtattttctggaagcc
ctttgtggacaagaagagcctctgctggcattcaagggtggaaaatatgtgtcagtggca
cccgtcccagacaccatgggaaaggaaatgggaagccaagagggaaaacaactggaagat
gaggaggaggacgtggtgattgaagactttgaagaagattcagaggctgaagggagcggg
ggcgaggatgacatcaaggagcttcgggccaagaagctggccctggccaggaagatagcc
gagcagcagcgtcgccaggaaaagatccaggctgtcctggaggaccacagtcagatgagg
cagatggagctcgagatcaggcccttgttcctcgtaccagacaccaacggcttcattgac
cacctggccagtctggcacggcttctggagagcaggaagtacatcctggtggtgcccctc
atcgtgatcaatgagctggatggcctggccaagggtcaggagacagatcaccgggctggg
ggctatgcccgtgtggtgcaggaaaaggcccggaagtccatcgagttccttgagcggcga
tttgagagtcgggactcttgcctgcgggccctaaccagccgtggcaacgaactcgaatcc
atcgccttccgcagtgaggacatcactggccagctgggtaacaacgatgacctgatcctc
tcctgctgccttcactactgcaaagacaaggcgaaggacttcatgcccaccaacaaagag
gagcccatccggttgctgcgggaggtggtgctgctgacggatgaccggaacctgcgtgtg
aaggcgctgacgaggaacgtgcctgtgcgggacatcccggccttcctcacgtgggcccag
gtgggctga
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integrated database retrieval system
