Mizuhopecten yessoensis (Yesso scallop): 110453157
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Entry
110453157 CDS
T05079
Name
(RefSeq) TNF receptor-associated factor 6-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04120
Ubiquitin mediated proteolysis
myi04140
Autophagy - animal
myi04144
Endocytosis
myi04517
IgSF CAM signaling
myi04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110453157
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110453157
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110453157
04140 Autophagy - animal
110453157
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110453157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110453157
04121 Ubiquitin system [BR:
myi04121
]
110453157
Enzymes [BR:
myi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110453157
Membrane trafficking [BR:
myi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110453157
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110453157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-TRAF_2
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
U-box
zf-rbx1
RING_XB3-XBAT31
zf-Nse
zf-ANAPC11
XhlA
CCDC3_C
MAD
Sina_ZnF
KLRAQ
zf-C3HC4_IRF-2BP1_2
PIBF1
CCDC160
bZIP_1
zf-RING_6
zf_C2HC_14
Nup54
DivIC
Imm7
CREPT
ADIP
Motif
Other DBs
NCBI-GeneID:
110453157
NCBI-ProteinID:
XP_021357680
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MDRQNQDETYQFRARSSNVPFSQNDVKFMDDFVDRNNSSEGDHHVLSTALAWSQNVSGVN
ADTSYDRNSDLTSRQNYFSHVHRSGQMASGSGSDYSSGFQLNQGREDGYDFEFVLPREDK
YDCPICLLVLREPYQTECGHRFCQNCIKRWLRETESEPRCPVDNAPLGEGQIFPDNFAKR
EILALLVQCPNHKDGCDTQVVLKQLKKHLNTCEFAFLPCPNRCSHMPLRKDLTNHLEEMC
PLRLLKCPTCHIELQAEYLQKHVDSCPLASVKCQFCGNEGLIREQLQRHLNNDCPKAVID
CEFKELGCKETVERQAMAKHMQHCQQDHMQQMCTTIVSLVRLLQFKPSTSCDSSRQSSTQ
TGQGEEGEQQSSSLNALSGLLQASMVFGPQLGQQLPQLPHRLRQQLSSDNTLSHGSSESS
SSRSGEAMGRRDDERIASSRTQVMSTISMTSNHNPGVDLEGAPIVPLHQDFEFQSLKCQN
ATQDESLARHEQSLVEIQQKNDTLERTNRDLRSKVKNLESTIADIEGRTCNGTYLWKIKN
YSKFRREAEHGDTTAIHSPPFYSNFYGYKLCIRVNLNGVDSARGTHLSVFIHFMQGEYDD
ILEWPFSGRIVLTVLDQNPVCEQRHHVIETLVSKPHLAAFQKPVTPRNHKGFGYMEFLPL
NILDNSTYIRSDTLLIKAFIVNSST
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacagacaaaaccaagatgagacttaccagtttcgtgcgagaagttccaacgtcccg
ttctcccagaatgatgtgaagttcatggatgatttcgtcgacagaaataattcatcagag
ggagatcatcatgttttatcaactgcacttgcttggtcacaaaacgtttctggtgtgaac
gctgataccagttatgaccgaaacagtgacctcacgagtcggcagaactatttctcacac
gtgcataggtctggccagatggcctccggaagtggaagcgattatagctcgggatttcag
ttaaatcaaggccgagaggatggctacgacttcgaatttgttctaccacgcgaagacaaa
tatgactgtccgatatgtttgttagttctaagagagccataccagacagaatgtggacac
agattttgtcagaactgtataaagcgatggctcagggagacggaatcggaaccacgctgt
ccggtcgataatgcccccctgggagaaggccagatatttcctgataattttgccaaacga
gaaatcctagctttattagtacaatgtcccaatcacaaggatggctgtgatacccaagtg
gttctgaagcagcttaagaaacacttgaacacctgtgaatttgcattcttaccatgtcca
aaccggtgtagtcatatgccactgagaaaagaccttaccaaccatttggaggagatgtgc
cccttacggcttctgaaatgtccgacctgtcacatcgagttgcaggcggagtatttacag
aaacatgtggattcatgtccgttggctagtgtgaaatgccagttttgtgggaatgaagga
ttgattcgagaacagctccaaagacacctgaataatgattgtccgaaggcagtgattgat
tgtgagtttaaagagctcggctgtaaagaaacggttgaacgacaagcgatggcaaagcac
atgcaacattgtcaacaagatcacatgcaacaaatgtgtacaacaattgtttcgctggtt
cgactactccagttcaaacctagtacctcatgtgacagctcacgccagtcctctacgcag
actggccagggagaggagggagaacaacagtcttcctcactaaacgctttatcgggtttg
cttcaagcaagcatggtgtttggaccccagttaggacagcaactgccccagttaccccac
agactgagacagcaattgagttcggataacacactaagccacggatcctccgagtcatct
agcagtagatcaggcgaagcgatgggtcgaagagatgacgaaagaatagccagtagtaga
acgcaagtcatgtcgactatcagtatgacttctaatcacaacccgggtgttgaccttgaa
ggcgcacccatagtaccccttcaccaggattttgaattccagtcacttaaatgtcagaat
gcaacacaggatgagagtctggctaggcatgaacaatcgttagttgaaattcaacagaaa
aatgacacgcttgaacggactaatagagatttaagatcaaaggtaaaaaatttggaaagt
actattgcagacattgaaggaagaacttgcaacggaacatacctctggaagataaaaaac
tactctaaatttagaagagaagccgaacacggggacacaaccgcaatccacagccctcca
ttttattccaacttctatggatataagctgtgtattcgcgttaatctaaatggtgtggac
agtgcaaggggaacacacctgtccgtgttcattcacttcatgcagggcgagtatgatgat
attctggaatggccgttcagtggtcgtatcgtgctaacggtgctagaccagaacccagtg
tgcgagcaaagacatcatgttattgaaactcttgtatccaagccgcatctagctgctttc
cagaagcccgtgactccaagaaatcataaaggattcgggtacatggaatttctgcctctt
aacatcctagacaattcaacctacattcgaagtgacactcttctaatcaaagcatttatt
gttaacagttctacgtga
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