Mizuhopecten yessoensis (Yesso scallop): 110466002
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Entry
110466002 CDS
T05079
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110466002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf_C2H2_13
Sina_ZnF
TRAFD1-XIAF1_ZnF
zf-C3HC4_3
Kazrin
zf-TRAF_2
zf-C3HC4_4
Histone_HNS_N
TMF_DNA_bd
zf_UBZ
Zn_ribbon_ACC
Motif
Other DBs
NCBI-GeneID:
110466002
NCBI-ProteinID:
XP_021377909
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MMSQEIDGRESSISPTFKTSIKNLDSISPTFKASITNPEVLPNFVSEPDDKCIVCQSLLW
NAFQLPCGHHVCQTDITALFRDKDTDVCRVEGCHDAFSKNDVFPDACKRREISNLTVYCS
YKDLGCPTEISWRNLPNHEASCTYRGKKCDKCGQAVLQSEIESHMSNLCEYREVSCHYCS
EPICLTAIEDHKSECRRFPLSCPNECGIHEILREQMDSHLDQCPRKKIACTFAKYGCENK
GTETEMTTHKKESVSVHLDMLVKPLIIPNQQNEPLSTKLSELENMKNTLDNVIQENARIP
QLVEENKKLQKEVQLNKTSIHEMKKYLASNGERVIQTGRRLEDKASVESVDTLKNEVTVM
KEALQTSNQRMTNIERAGVVVGGAGGGNSKVIQQVEKQVGHMDIRLCELDLRLQLQETVN
YDGVLMWKIRDYSRRKREAVSGKTLSLYSQPFYTSRYGYKLCGRIYLNGDGTGKGSHLSF
FLVVMRGDFDALLPWPFQLPISMKLLDQNGTYQHVSEQFMPNASSGSFQRPKSEMNVACG
VPRFALHTKLETETYLRDDTIFLRVAVDSSNAQTLY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacaagagattgatggtagggaatcatcaatctcgccaacatttaaaacctcc
atcaaaaaccttgattcaatttcgccaacatttaaagcctcaatcacaaatcctgaagtg
ctacccaactttgtgtcggagccagacgacaaatgtatagtctgtcagtcgctgttatgg
aatgccttccagctaccgtgtggacatcacgtttgtcagaccgatatcactgctctcttc
agagacaaagacacggacgtttgtcgtgtggaaggctgccatgatgccttttcaaagaat
gacgtttttccagatgcatgtaagcgacgtgaaatatcaaacctaactgtttactgttcg
tacaaggatctgggttgtccaacagaaatatcttggaggaatttgccgaatcatgaagca
tcgtgcacttatcgaggaaagaaatgtgataaatgcggccaggcagtcttacagtccgag
atagagtcacacatgtcaaacctatgtgaatatagagaagtatcctgtcactactgttca
gaacccatctgtttaacggcaattgaggatcataaatcggaatgcaggcgtttcccattg
agctgtcccaacgaatgtggaattcacgaaatactacgagagcagatggactcacacttg
gatcagtgtccacgcaagaagatcgcgtgtacatttgccaagtatggctgtgaaaataaa
ggtacagaaacagaaatgaccacccataagaaggagagtgtctctgtacatcttgacatg
ctggtaaaaccattaatcatcccaaatcagcagaacgaaccgctgtctacgaaattgagc
gaattggaaaacatgaagaatacattggacaatgtcattcaagaaaatgcaaggatcccc
caactcgtcgaagaaaacaaaaaactacaaaaagaggttcaacttaacaaaacatcaatt
catgaaatgaagaagtatctggccagcaatggagaaagggttatacagacaggacgccga
cttgaagacaaagcgtccgtggagtctgttgatacactcaagaatgaagtcacggtgatg
aaggaagcattgcagacatccaatcagagaatgaccaacatagagcgtgcgggggtggtt
gtaggtggtgctgggggtggaaactctaaagttatacagcaagtagaaaagcaggttgga
catatggatatccgactttgtgaattagacctgagacttcagctgcaagaaacagtaaac
tacgatggtgtcttgatgtggaagatccgagattacagtcgaagaaaacgtgaggctgtt
tctgggaaaaccctgtcgttatacagtcaaccgttttacaccagtaggtatggatataag
ctttgtggacggatctatctgaacggtgatgggaccgggaagggatctcacctctcattt
ttcttagttgtgatgcgaggcgacttcgatgcacttctgccttggcctttccagctaccc
atttctatgaaactcctagaccaaaacggcacctatcaacatgtcagcgaacaattcatg
cctaatgcgagtagtggcagtttccaaagaccaaagtcggaaatgaacgttgcttgtggc
gttccccgctttgctctccatactaaactggaaacggagacatatctgagagacgacacc
atattcctgagagttgctgtggactcttctaatgcacaaactttgtactga
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