KEGG   Mycetocola zhujimingii: C3E77_08805
Entry
C3E77_08805       CDS       T05409                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
myl  Mycetocola zhujimingii
Pathway
myl03030  DNA replication
myl03410  Base excision repair
myl03420  Nucleotide excision repair
myl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:myl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C3E77_08805
   03410 Base excision repair
    C3E77_08805
   03420 Nucleotide excision repair
    C3E77_08805
   03430 Mismatch repair
    C3E77_08805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:myl03032]
    C3E77_08805
   03400 DNA repair and recombination proteins [BR:myl03400]
    C3E77_08805
Enzymes [BR:myl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     C3E77_08805
DNA replication proteins [BR:myl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C3E77_08805
DNA repair and recombination proteins [BR:myl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     C3E77_08805
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C3E77_08805
   MMR (mismatch excision repair)
    DNA ligase
     C3E77_08805
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C3E77_08805
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT HHH_5 Nlig-Ia HHH PTCB-BRCT
Other DBs
NCBI-ProteinID: AWB86709
LinkDB
Position
complement(1847666..1849951)
AA seq 761 aa
MTESIETQGTRDDLETAAAEAADLTTRILELRDAYYERDTSLVSDAEYDAMMHRLEQLEH
FFPELQTQDSPTQTVGGRAQASLFDPVTHVERMLSLDNVFSADELRAWSERVERASGRKV
HYLTELKIDGLAVNLRYERGRLVSAATRGDGVVGEDVTENVAAISSIPERLSGTGHPDLV
EVRGEIFFPVESFRELNELQLAAGEKVFANPRNAASGSLRQKAEGKNAAQLTLMKNRLSR
LQMLVHGVGAWPNPPVSAQSEVYDLLAGWGLPTSTHYRVFDNIDGAVGFIDYFGEHRSSV
EHEIDGIVVKVDELALHDELGATSRAPRWATAYKYPPEQVNTKLLNIVVSVGRTGRATPF
AQVEPVRVAGSTVSQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVVELRDGTER
EFVMPERCPSCDTPLRPAKEGDKDLRCPNSRSCPAQVRGRVEHVGSRGALDVEGLGEVAA
AALTQPLEPTRPPLADENGDVSEAGLFAMTIADLFPVEVTVIDIETGLPKLTDDGAVKRV
TPFRRRRAKKDGLFDPDSEVFNGDEFSVPSKGALELLDNLAASRTKPLWRILVALNIRHV
GPVAARALANYFGSLDAIRAATRDELAETEGVGGIIADAVIDWFEVDWHKQIVEEWRKAG
VQFATPGHPGPGAAGNEDGVLAGITVVATGSLEGFTREGAQEAIIAAGGKAASSVSKKTD
FVAAGPGAGSKLGKAEELGLRIIDAEQFALLVTKGPAALDE
NT seq 2286 nt   +upstreamnt  +downstreamnt
gtgacagaaagcatcgagacgcagggcacacgcgacgacctggagacggcggcggcagaa
gccgctgacctcaccacacggatcctcgaactccgcgacgcctactacgagcgagacacc
tcgctcgtctccgacgccgagtacgacgccatgatgcacaggctcgagcagctcgagcac
ttcttccccgagctgcaaacgcaggacagccccacccagaccgttggcggccgcgcgcag
gcatcgctcttcgatccggtcacgcacgtggaacggatgctgagcctcgacaacgtcttc
tccgccgatgaactccgcgcgtggagcgagcgggtggagcgagcgtcaggccgcaaggtc
cactacctcaccgagctcaagatcgacggcctcgccgtgaacctgcgctacgagcggggt
cggctcgtgagcgccgcgacccgcggtgacggcgtcgtcggcgaagacgtcaccgagaac
gtcgccgcaatctcgtccatccccgagcgcctcagcggaaccgggcatccagacctggtc
gaggtccgcggcgagatcttctttcccgtcgaatcgttccgcgaactcaacgaactgcag
ctcgccgccggtgagaaggtcttcgccaacccccgcaatgcggcgagcggcagcctcagg
cagaaggcagagggcaagaacgccgcccagctcacgctgatgaagaaccggctgagccgg
ctgcagatgctcgttcacggcgtcggggcctggccgaacccgcccgtctccgcgcagagc
gaggtctacgacctcctggcggggtgggggctgcccacatcgactcattaccgggtcttc
gacaacatcgacggagccgtcggcttcatcgactacttcggtgagcaccggtcgagcgtc
gagcacgagatcgacggcatcgtcgtcaaggtcgatgagctcgcgctgcacgacgaactc
ggtgcgacgagcagggccccgaggtgggcgacggcgtacaagtacccgccggaacaggtc
aacaccaagcttctcaacatcgtggtgagcgtcggcagaacagggcgggctaccccgttt
gcgcaggtcgagcctgtgcgcgtcgccggctcgacagtcagccaggcgacgctgcacaac
caggacgtcgtcaaggcgaagggtgtgctcatcggcgacaccgtcgtgctgcgcaaggcc
ggtgacgtgatccccgagatcctggggcccgtcgtcgaactgcgcgacggcaccgagcgc
gagttcgtgatgccagagcgctgcccgtcgtgcgacaccccgcttcggccggcgaaagag
ggtgacaaagacctccgctgccccaattcccgttcgtgcccggcgcaggtgcggggccgg
gtggaacacgtcggttcccgtggcgccctcgacgtcgaagggctcggagaggttgcggct
gccgcgctgacgcagccgctcgaaccgacacgaccaccgctcgccgacgaaaacggtgac
gtgtccgaagccggactgttcgcgatgaccatcgccgacctgttcccggtcgaggtgacc
gtgatcgacatcgagacgggcctgccgaagctgaccgatgacggtgctgtaaagcgagtc
actccgttccgccgccgcagggcgaagaaagatggcctgttcgaccccgactcggaggtg
ttcaatggcgacgagttctccgtgccgtccaagggtgcgctcgagctgctcgacaacctc
gcagcgtccaggaccaaaccgctgtggcgcatcctcgtcgccctgaatatccgacacgtc
ggccctgtcgctgctcgggctctcgcgaactacttcgggtcgctcgacgccatccgcgcg
gccacccgtgacgaactcgccgagacagagggtgtgggcggcatcatcgccgacgcggtc
atcgactggttcgaggtcgactggcacaagcagatcgtcgaggagtggcgaaaggcgggc
gtccagttcgcgacgcccggccaccccggccccggcgccgctggcaacgaagacggtgtc
ctcgccgggatcacggtcgtggcgaccgggtcgctcgagggattcacccgcgagggtgcc
caggaagcgatcatcgccgccggcggcaaggcggcatccagtgtgtcgaagaagacggat
ttcgtcgctgcagggcccggtgcagggtcaaagctcggcaaggccgaggaactcggactc
cggatcatcgacgccgagcagttcgcgctgctggtgacgaaaggacccgcggcgctcgac
gaatga

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