Myotis yumanensis (Yuma myotis): 139013992
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Entry
139013992 CDS
T10762
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
myum Myotis yumanensis (Yuma myotis)
Brite
Chromosome and associated proteins [BR:
myum03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139013992 (SMCHD1)
DNA repair and recombination proteins [BR:
myum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
139013992 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139013992
NCBI-ProteinID:
XP_070276660
LinkDB
All DBs
Position
Unknown
AA seq
2004 aa
AA seq
DB search
MAAAGGGGPSAGTGRGGRGDRCRKVYLFDRRKKESEQGDRVVQVGERSDYAGFRASVRQT
LGISPEEKFVITTTSRKEITSDNFDETVKDGVTLYLLQSVDQLLLTATKERIEFLPHYDT
LVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGIRKIQIKLHFDETQGKPAVAVI
DNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGKQAV
FFVGQSARMISKPADSQDVHELLLSKEDFEKKEKNKESIYSGFIRNRKPCDSVHITNDDE
RFLHCLISEEKEKVSFTAVVITGVQSEHIPYLKNYFHLWTRQLAHIYHYYIHGPKGNEKR
TSKEVGPFNNIDIEISMFEKGKAPKIVNLREIQDDMQTLYINTATDSFEFKAHVEGDGVV
EGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCYIIEKAARGKRPIFECFWNGRLIPY
TSVEDFDWCAPPKKRGLVPIECYNRISGALFTNDRFQVSTNKLTFMDLELKLKDKNTLFT
RISNGQEQRVKIDREFSFWLKDCHEKYDKQIKFTLFKGISTRSDLPAKKQGPWATYSAIE
WDGKIYKAGQMVKTIKTLPLFYGSIEKFFLYGNHDGEVYATGGEVQIAMEPRALYDETKI
VPIAKLDRTFAEKAVKKYVEDEMARLPDRLSVTWPEGDELFPNEIRPAGTTIGALRIEIL
NKKGEAMQKLPGTGHGGSKKLLVELKVILHTSSGNKEIISHISQHGGKWPYWFKKMENIQ
KLGNYTLKLQVVLNESNADTYAGRPLPCKAIKFSVKEGKPEKFSFGLLDPPFRVGVPFNI
PLEFQDEFGHASQLINDIQPVLEASGLSLQYEEITKGPNCIIRGVTAKGPVNSCQGKNFN
LKVILPGFKEDSQILKIRLLPGPPHQLKVKPDSEFLVIENGTAFPFQVEVLDESDNITTQ
PKLVVHCKFLGAPNLPVYTVDCSSSGTSILSGPAIQVQNIKKDQTLKAKIEIPSCKDVAP
VEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDVMHNLIFQMYDEGEREIHV
TSTLAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVRP
LPDEPKHLKCELKGAKTVQMGQELQGEIVVIVTDQYGNQIQAFSPSSLSALGIAGIGLDS
SQLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLIDWP
ELKEFVPVINGKELQHPLIVQLCDQWDNPAPVPLVKINIIKANNLKLTPSNQQYKTDEKG
RANLGVFSVYANPRGKHTMQVKAIHNRNTIEGPIIKLMILPDPEKPIRLNVKYDKDTLFL
AGGTFTDFMITVISEDDSIIKNINPARITMKMWKHSNNGNRPPANAETFSCNKIKGNDKE
DGCFYFRDKAIPHKVGTYCIQFGFMMDKALILNSEQIIIDVQPNQPVKLVPKIQPATPAV
SNVHSVANRTLVKDLHLIITDDFNNQTGLDLVGTVIATIKGSNEEDTDTPLFIGKVRTLE
FPFVKGSANITSLVLAENSPGKDSTEYFIKFELQLPDLSRTLESYSLPFMFSNDVKKQQQ
MLAFAKQKDELSQSIEMYRTVFETSRQLIDEMKCQVEVAKSKEAQLRNELKTNNIDIPTT
QQVPHIEALLKRKILEQEELKKKPRRSCTLPNYTKSSGNILGKIAHLAQIEDDRAAMVIS
WHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKNLPDWRRPLPHYRNGKLYFR
PIGDPVFARDLLTFPDNIEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLTR
DGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLVLGQQIDLLQQYRNALDKLNSL
TKELNSELEYLQSPEMKKKKQELDEREKTLKLMEQHLLGVTPTRKGSDSLGHPTKVEMTD
CPNPPKRMRREVTRQNRTVTKTNV
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgggcggcggcgggccctcggcggggactggaaggggcggccgaggcgac
cgctgcaggaaggtgtacttgttcgaccggcgcaagaaggagtcggagcagggcgaccgg
gtggtgcaggtcggggagcgctcggactacgcgggattccgcgcctcggtgcgccagaca
cttggcatttcacctgaggaaaaatttgttattacaacaacaagtaggaaagaaattacc
agtgataattttgatgaaactgttaaagatggagttactctatacctgctacagtcagtc
gaccagttactactaacggctacaaaagaaagaattgaattcctacctcactatgataca
ctggttaaaagtggcatgtatgagtattatgcaagtgaaggacaaaatcctttgccattt
gctcttgcagaattaattgacaattcattgtctgctacttctcgtaacactgggattaga
aaaatacagatcaaattgcattttgatgaaacacaaggaaaacctgctgttgcagtgata
gataatggaagaggaatgacctctaaacagcttaataactgggctgtgtataggctgtcc
aagtttacaaggcaaggagattttgaaagtgatcattcaggatatgttcgaccagtacca
gtgccacgcagtttaaatagtgatatttcctatttcggcgttgggggcaagcaggctgtt
ttctttgttggacaatcagccagaatgataagcaaacctgcagactcccaagatgttcat
gagcttttgctttctaaagaagattttgagaagaaggagaaaaataaagagtcaatatat
agtggatttattagaaacagaaagccatgtgactctgttcacattacaaatgatgatgaa
agatttctacattgccttatctcagaggagaaggaaaaagttagctttactgctgtggtt
atcacaggagtacaatcagaacacataccgtacttgaaaaattatttccatctttggaca
agacagttggcgcatatttatcattactatattcatggcccaaaaggaaatgaaaaacgt
acatcaaaagaagttggacctttcaacaacattgatattgaaatttctatgtttgaaaaa
gggaaggcacctaagattgtcaacctaagggaaatacaagatgacatgcagacgttgtat
ataaacacagcaactgatagttttgagttcaaagctcacgttgaaggagacggtgtagtg
gaagggattatccgatatcaccctttcttatatgatagagaaacttaccctgatgatcca
tgctttccatcaaaattaaaagatgaagatgatgatgatgattgttatataattgagaaa
gctgcaagaggaaaaaggcctatttttgaatgtttttggaatggacgactaataccatat
acatctgttgaagactttgactggtgtgctcctcctaagaagagagggcttgtaccaatc
gagtgctacaatagaatatctggtgcattattcactaatgacagattccaggtcagcaca
aataaactgacttttatggatcttgagctaaaattgaaagataagaacaccctttttaca
aggatttcaaatggacaggagcagcgagtgaaaattgacagagaattttctttctggctc
aaagactgtcatgaaaagtatgacaaacaaataaaatttacactttttaaaggaataagt
acacgttctgatcttcctgctaaaaagcagggcccctgggccacatactcagcaatagaa
tgggatggaaaaatatacaaagcaggacagatggtgaagacaatcaagacacttcctctt
ttttatggaagcatagaaaaattttttctttatggtaatcatgatggagaagtatatgct
actggaggagaggttcaaattgcaatggaaccacgagcactgtatgatgaaacaaaaatt
gtgccaattgcaaaactggataggacctttgctgagaaagctgtaaaaaaatatgtagaa
gatgaaatggcaaggcttcctgatagattgtcagtaacttggcctgaaggagatgaatta
tttccaaatgaaattaggcctgctggaactaccattggtgcattaaggattgaaatactg
aataaaaaaggagaagcgatgcaaaagcttccaggaacaggtcatggagggtcaaagaaa
ctactggttgagctcaaagttatattacacacttcaagtggaaataaagaaatcatttca
catattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaaaatattcaa
aaattggggaattatacattgaaattacaagttgtattgaatgaaagtaatgcagacact
tatgctggaagaccactaccatgtaaagcaattaaattttctgttaaagagggtaagcca
gaaaaattttcatttggtcttctggatcctccttttcgtgttggagttccattcaatatc
cctctggagttccaggatgaatttggtcatgctagtcaactaataaatgatattcagcca
gttcttgaagcaagtggtttatctttacaatatgaagaaataaccaagggaccgaattgt
ataattcgaggtgttacagctaagggccctgtaaattcttgtcaaggcaagaattttaat
ctgaaggttattcttccgggttttaaagaagactcacagattttgaaaattagattacta
ccaggtccccctcatcaattgaaagtgaaacctgattctgaatttttagttatagaaaat
ggaacagctttcccatttcaggtagaagttttggatgaatcagacaatataacaacacaa
ccaaaattggttgttcattgtaagtttttaggtgctcctaatcttccagtctacactgtg
gattgcagtagttctggaaccagtattttatcaggacctgcaattcaagttcagaatatt
aagaaagaccagacgcttaaagctaaaattgaaatacctagttgtaaagatgtggcacct
gtggagaaaacgattaagttgcttcccagtagccatgttgcaagattacagatattcagt
gtggaaggacaaaaggcaatccagatcaaacaccaagatgaggttaattggatagcaggc
gatgttatgcataatcttatctttcaaatgtatgatgaaggagaaagagaaatccatgta
acatcaactttagcggagaaaattaaagttaattggactcctgagattaacaaagaacac
ttgctgcaaggtctgcttcctgatgtacaagtaccaacatctgtaaaagatatgcgttat
tgccaggtttcatttcaggatgatcatgtgtctttggaaagtgcatttacagtaagaccc
ctacctgatgaacctaaacatctaaagtgtgagttgaaaggagcaaaaacagtacagatg
ggccaagagcttcaaggggaaatagttgtaatagttacagatcagtatggaaatcagatt
caagcattttcaccaagttctttatctgccttgggaattgctggtattggacttgatagc
tcacagttgaagactacctttcaggaaaatacacagagtataagtgtaagaggcatcaaa
tttattccaggtcctcctggaaataaggatctttgttttacttggcgtgagttttctgac
tttattcgagtacagctaatttctggaccaccagctaaacttctccttatagactggcca
gaattaaaggagtttgttccagtaattaatggaaaagaattacagcatcctctcattgtt
caactttgtgatcagtgggataatccagcacctgtaccactggttaaaataaatatcata
aaagctaacaatttaaagctcactccttcaaaccaacagtataaaacagatgaaaagggc
agggctaatttgggagtgttcagtgtttatgcaaaccctagaggaaaacatactatgcag
gtgaaagccatccataacaggaataccatagaaggacctataattaagttaatgattctt
ccagatcctgaaaaacccattcgtctcaatgttaaatatgacaaagatactttattttta
gcagggggtactttcactgattttatgattactgttatttctgaagatgatagcatcatt
aaaaatattaatccagcacgtattaccatgaaaatgtggaagcactctaacaatgggaac
cgaccaccagcaaatgcagaaacatttagttgtaataaaataaaaggtaatgacaaggaa
gatggctgcttctacttcagggataaagcaattcctcataaagtggggacatattgtatc
cagtttggttttatgatggataaagcacttattcttaacagtgaacagattataattgat
gttcaacctaatcaacctgtgaagttagtacctaaaattcagccagccacaccagctgtt
tccaatgttcactcagttgccaataggaccctggtcaaagatttacatcttattatcacg
gatgacttcaacaatcagactggacttgatttggttggcactgtaatagctaccatcaaa
ggttctaatgaggaagatactgatacaccactctttatcgggaaagttagaacacttgaa
ttcccttttgtaaaaggttccgctaacatcacgagtctagtgctggcagaaaatagtcct
ggaaaggatagtactgaatattttattaaatttgagcttcagctaccagatttatcaaga
acattagaatcatatagtctaccatttatgttttctaatgatgttaagaagcagcaacaa
atgctagcatttgcaaaacaaaaggatgaattatctcaatctattgaaatgtatagaact
gtatttgaaaccagcagacagcttattgatgaaatgaagtgccaagttgaagtagcaaaa
tcaaaagaggcccagttgcgaaatgaactaaaaacaaataatattgacattcctacaaca
caacaggtgccacacattgaagcacttttaaaaagaaagatattagaacaagaagaacta
aagaaaaaaccaagaagatcatgtactcttccaaactatactaaaagcagtggaaatatt
ttgggaaagattgcacacttggcacaaattgaagatgatagagctgcaatggttatttct
tggcatctggcaagtgatatggattgtgttgtaaccttgaccactgatgctgcacgtcgt
atctatgatgaaacccaaggtcgtcagcaagtgttaccacttgattctatttataagaag
aatcttccagattggagaagacctctgcctcattatcgaaatggaaaattatattttaga
cccattggagatccagtctttgcccgagatttgttaacatttccagataacatagaacat
tgtgaaacagtatttggtatgctattaggagacaccattattttggataatttggatgct
gccaatcattatagaaaagaggttgttaaaatcacacactgtcctacactgctcacgaga
gatggagatcgcattcgaagtaatggaaagtttgggggccttcagaataaagctcctcca
atggacaaacttcggggaatggtatttggagctccggtaccaaagcagtgcctggtctta
gggcaacaaatagatcttcttcaacagtatcgtaatgctctggacaagttgaacagtttg
accaaggaacttaacagtgaattagagtacctgcagtctcctgaaatgaagaagaaaaaa
caagaacttgatgaacgagagaaaactctgaaactaatggagcaacaccttctaggtgtg
actcccacacgtaagggcagtgattcattaggtcatccaacaaaggttgaaatgacagat
tgtccaaatcctcctaaaagaatgagaagagaagttacaagacaaaatagaactgtaacc
aaaacaaatgtgtga
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integrated database retrieval system
