KEGG   Maylandia zebra (zebra mbuna): 101483474
Entry
101483474         CDS       T02814                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101483474 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mze03041]
    101483474 (smndc1)
Spliceosome [BR:mze03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101483474 (smndc1)
 Complex B
    101483474 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    101483474 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 PUA_4 DUF2730
Other DBs
NCBI-GeneID: 101483474
NCBI-ProteinID: XP_004551599
UniProt: A0A3P9DR42
LinkDB
Position
LG13:14956259..14962080
AA seq 238 aa
MSEDLVKQLSNYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPAETVAK
TSGSDTVPVKHGWKVGDKCLAMWSQDGQIYEAEIEEIDRDNGTAAVTFTGYGNAEVIPLQ
NLKAVEEGKLLEEDGSMKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaggacttggttaaacagttgagcaactacaaagcccagctgcagcaagttgaa
gtcgctctatctactgatccagacaatgaagaccttcttaaactccaaaaagacttacag
gaagtcattgatttgacaaaagacctcctgacctcacagccggcagagactgttgccaaa
acaagtggctcggacacagttcctgtgaagcatggctggaaagtgggagacaagtgtctg
gctatgtggagtcaggacggacagatttatgaagcggagattgaggagatagaccgagac
aacggcactgcagccgttaccttcactggatatgggaatgctgaagtgattcctctacag
aacctcaaggcagtagaggaaggaaagcttttggaggaggatgggagtatgaagccaaag
tcgaggaaagagcagatagcagagcagagggagtataaaaagaagaaagctcagaagaag
gtacagaggatgaaggagctggagcaagaacgagaggagcaaaagtcaaagtggcagcag
ttcaacaacaaagcctactcaaagaacaagaaaggccaggtgaagaggagcatatttgca
tctccagaaagcgtcaacggcaaggtgggagtgggaacgtgtggtattgcagacaagcct
atgacccagtaccatgacacgtccaaatacaatgtcagacatctaatgccacaatga

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