Maylandia zebra (zebra mbuna): 101487021 Help Entry 101487021         CDS       T02814                                  Symbol thbs1a Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism mze  Maylandia zebra (zebra mbuna) Pathway mze04115   p53 signaling pathway mze04145   Phagosome mze04148   Efferocytosis mze04350   TGF-beta signaling pathway mze04510   Focal adhesion mze04512   ECM-receptor interaction mze04518   Integrin signaling mze04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:mze00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     101487021 (thbs1a)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101487021 (thbs1a)    04518 Integrin signaling     101487021 (thbs1a)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     101487021 (thbs1a)    04148 Efferocytosis     101487021 (thbs1a)   09143 Cell growth and death    04115 p53 signaling pathway     101487021 (thbs1a)   09144 Cellular community - eukaryotes    04510 Focal adhesion     101487021 (thbs1a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101487021 (thbs1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mze04131]     101487021 (thbs1a)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mze00536]     101487021 (thbs1a) Membrane trafficking [BR:mze04131]  Endocytosis   Phagocytosis    Opsonins     101487021 (thbs1a) Glycosaminoglycan binding proteins [BR:mze00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101487021 (thbs1a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 cEGF TSP1_ADAMTS EGF Motif Other DBs NCBI-GeneID:  101487021 NCBI-ProteinID:  XP_004540818 UniProt:  A0A3P9BSZ8 LinkDB All DBs Position LG19:complement(30526506..30534710) Genome browser AA seq 1170 aa AA seqDB search MMLCGISLLLMLWSCEGARLAESRDDNSVYDLFDLARVNKRHHGVSTVKGQDPNSLAYKV LNASLIPPVPDSSFRDLLDSIQTERGFLLLVNLKQFKKTRGSLLTVEKTDGSGPIFEIIS NGKANTLDLVYSTVDQQQVVSIDEVDLATGQWKNITLFVQDDQAQLFVGCEGFKHSELEV PIQKVLSQEVADTARLRIGKGALKDKFYGVLQNVRFVFGTTLDAILRNKGCQTGAAITDV MTLDIPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDIANMFNELNGLNKVVRQLSNNLQR LESESRRIYMDLHKGVCIHNGIKYQDRDEWTVDSCTECTCQKSVTVCRKITCPLIPCANA TVPDGECCPRCGTPSDYAEDGWSAWSEWTQCSVTCGRGIQQRGRSCDRINSKCEGTSVQT RDCYPQECDKRFKQDGAWSHWSPWSSCSVTCGEGVMTQIRLCNSPTPQMGGKDCEGEGRH TKVCRKSPCPINGGWGPWSPWDICSVTCGGGVQTRKRLCSDPAPKYGGKDCIGDASESQI CNKQECPIDGCLSSPCFPGTKCTSFRDGSFKCGRCPSGYTGNGITCKDIDECKEVPDACH IHNGVHRCENTEPGYNCLPCPPRFSGPQPFGRGVAEATAKKQVCVPRNPCKDGSHNCHKN ANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLPCVENATYHCKKDNCPN LPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPSQDDADRDEVGDNCDNCVYV ANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPLEH NPDQIDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDN DGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFAISETDFRRF QMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDRDD DYAGFVFGYQSSSRFYTVMWKQITQTYWSNTPTRAQGYSGLSIKVVNSTTGPGEHLRNAL WHTGDTPGQVRTLWHDRKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNIYD KTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatctctttgctcttgatgctttggagttgtgagggcgcacggctg gcagagagtcgggatgataacagtgtgtatgacttatttgatttggcccgggtaaataag agacaccatggcgtgagtacggtcaaaggccaagacccaaacagcctagcgtacaaggtc ctgaacgcgagcctgatcccccccgtccccgacagctccttcagggacctcctcgactcc atccaaacagagcgaggcttccttctcctggtcaacctgaagcagttcaaaaaaaccaga ggcagccttttaactgttgaaaaaaccgacggatccgggcccatcttcgagattatttcc aacgggaaggcgaacacgctggatttggtgtactccaccgttgaccagcagcaggtcgta tctatcgatgaggtcgatttggccaccgggcaatggaagaacatcaccctgttcgttcag gatgaccaggcgcaacttttcgtcggctgtgaagggttcaaacactcagagttggaagtg ccaatccagaaagtgctctcccaggaggtggcagacacagccagactcaggatcgggaag ggagctctaaaggacaaattttacggagtactccagaatgtgcgctttgtctttggtaca actctggatgctatactgagaaataaaggatgccaaactggagctgctataactgatgtc atgaccttggatatcccagtcaatggctcaagccctgccattaggaccgattacactggt cacaaagccaaagatctgcagtccgtctgcggcttctcctgtgaagacattgccaacatg tttaacgagctcaatggactcaataaggttgttagacagctgtcaaataacctccaaaga ctggaaagcgaatccagaagaatttatatggatttgcacaaaggagtttgcatccacaac ggcatcaagtaccaggacagagatgaatggaccgtcgatagctgcaccgagtgcacatgc cagaaatctgtgaccgtgtgtcgcaaaatcacctgccctctgatcccatgcgctaatgcc accgtgcccgacggagagtgctgccctcgctgtggaacaccaagcgactacgcagaagac ggctggtccgcctggtctgagtggacccagtgttctgtgacttgcggccgtggcatccag cagcgcggccgctcctgcgaccgcatcaacagcaagtgtgagggcacctctgtgcagacc cgtgactgctacccacaagaatgtgacaaacgcttcaagcaggatggagcctggagccac tggtcaccctggtcttcctgctctgtgacctgcggtgagggggtcatgactcaaattcgc ctttgtaactcccccacgccccagatgggcggcaaggactgcgagggagagggacgtcac accaaagtctgcaggaagtcgccctgtcctatcaatggaggctggggaccttggtcacct tgggacatctgctctgttacctgcggaggaggcgttcagacccgtaaacgtctctgttcc gaccctgcccccaaatatggtggaaaggactgtatcggcgatgcttctgaatctcaaatt tgcaacaaacaggagtgtcctattgatggctgtctctccagcccctgcttcccaggcaca aagtgcaccagcttccgagacggctcattcaagtgtggcaggtgtccatccggctacaca gggaacggcatcacctgcaaagacatcgacgaatgcaaagaggtccccgatgcttgccat attcataacggagtccaccgttgcgaaaacacggagccgggttacaactgtcttccctgt cccccgcgtttctctggtcctcagccgtttggaagaggtgtggcagaggcaactgctaaa aaacaggtttgcgttcctcgcaacccttgcaaggacggaagccacaactgccataaaaat gcaaactgcatctacttgggtgtcttctccgagtctatgttccgctgtgagtgcaagcca ggatatgccgggaatggacgcatttgcggagaggacagcgacctggatggatggcccaac actgacctgccgtgtgtggaaaatgccacttatcactgcaagaaggataactgccccaac cttcccaactccggccaagaagatcatgacaaagacggcctgggtgatgaatgtgaccac gatgatgacaatgatgggatccccgatgatagggacaactgcccaagagtgtacaacccc tcccaggatgatgcagacagggatgaagttggtgataactgtgacaactgtgtatatgta gccaacactgaccaaacagacactgacaacaacggagagggtgatgcctgcgctgttgac attgatggtgatggcatcctgaatgagaatgacaactgcccatatgtctacaacgtggac cagagagataccgacagggacggcgttggagatcactgcgataactgccctctggagcac aatcctgatcagatcgactctgactcggatcgcgtgggagacaagtgcgacagcaaccag gacattgacgaggacggtcaccagaacaacttggataactgcccctacattccgaatgcg aaccaggcagaccacgacaaggatggcaagggtgatgcctgcgaccacgatgatgacaat gacggcattccagatgacaaagacaactgcagactggcctttaaccctgatcagctggac tctgatggtgatggacgtggtgatgtgtgcaaagatgattttgatcaagataatgttttg gacatctatgatgtatgcccggaaaactttgccatcagtgaaaccgacttccgcagattc cagatggttcctctggaccccaaaggtacctcccagatcgaccccaactgggttgtccgg catcagggcaaggagctggtccagactgtcaactgcgaccctggcattgctgtcggttat gatgagttcagcgcggtggacttcagtggaacattcttcatcaacacggacagagacgat gactacgctggtttcgtgtttggctaccaatccagctcgcgcttctacacagtgatgtgg aaacagatcacccagacgtactggtccaacacacccacaagagctcagggctactccggc ttgtcaatcaaagtggtcaactccaccacagggcccggtgagcacctgaggaacgccctg tggcacaccggagacaccccaggacaggtgcgcactttgtggcacgaccgcaagaatatt ggctggaaagacttcactgcctacagatggcatctgacccacagacccaagactggactt atcagagtggtcatgtatgaaggcaagagaatcatggctgactccggaaacatctacgac aaaacctacgccggtgggcggctaggcttgtatgtcttctctcaggagatggtttacttc tcagacctcaaatacgaatgcagagatacataa

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