Candidatus Mycalebacterium zealandia: GKS04_02960
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Entry
GKS04_02960 CDS
T10121
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mzl Candidatus Mycalebacterium zealandia
Pathway
mzl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mzl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKS04_02960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mzl03400
]
GKS04_02960 (nth)
Enzymes [BR:
mzl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GKS04_02960 (nth)
DNA repair and recombination proteins [BR:
mzl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GKS04_02960 (nth)
Prokaryotic type
GKS04_02960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
HHH_8
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
QMU56132
UniProt:
A0A7D7Z9U2
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All DBs
Position
607031..607765
Genome browser
AA seq
244 aa
AA seq
DB search
MKSLKNGISLSKRTAISLRGKRISSPPQKTDKSNPVKEKVSRVSVFLKKQYPDVRCHLNY
NSAFELLIGSILSAQCTDKRVNEITPGLFKKYPDVASFASAKGSELEKDIFSAGFYKNKT
KSIIGCCKGIADKHGDAVPDTMEELKALPGIGRKTANVVLGNWFGKPGIIVDTHITRLSR
RLGMSSKNTAEGIEKDLMALVPRKDWTFFSNSLGEHGRQICKSRAPLCTRCGVSEFCVWS
GKND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccctgaaaaatggcataagtttatcaaagagaacagcgatttctttgagggga
aaaaggatctcaagcccgccacaaaagactgataaatccaaccccgtcaaggaaaaagtt
tcacgcgtctcggtttttcttaaaaaacaatatcctgacgtccgctgtcatttgaactac
aactccgcgtttgaactgcttatcggttcaatcctttcggctcagtgcacggacaagagg
gttaatgaaatcactccggggcttttcaaaaaatatcctgacgtcgccagttttgcgagc
gcgaaaggctccgaactggaaaaggatattttcagcgcggggttttataaaaacaaaacg
aaatcaataattggttgctgtaaaggaattgccgacaaacacggcgatgcggttcccgac
acaatggaagaacttaaagcactgcccggaataggcaggaaaaccgccaatgtggttctc
ggaaactggttcggtaagcccggcatcattgttgacacacacataacccgtctttcccga
aggctcggaatgagttcaaaaaacaccgccgaaggcatagaaaaagacctgatggcgctt
gtgccgcgaaaagactggacatttttttcaaactctttgggcgaacacggaaggcagatt
tgcaaatcgcgcgcgcctctttgtaccagatgcggagtttctgaattttgcgtatggagc
ggaaaaaatgattga
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