Candidatus Mycalebacterium zealandia: GKS04_03610 Help Entry GKS04_03610       CDS       T10121                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism mzl  Candidatus Mycalebacterium zealandia Pathway mzl03030   DNA replication mzl03410   Base excision repair mzl03420   Nucleotide excision repair mzl03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mzl00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GKS04_03610 (ligA)    03410 Base excision repair     GKS04_03610 (ligA)    03420 Nucleotide excision repair     GKS04_03610 (ligA)    03430 Mismatch repair     GKS04_03610 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mzl03032]     GKS04_03610 (ligA)    03400 DNA repair and recombination proteins [BR:mzl03400]     GKS04_03610 (ligA) Enzymes [BR:mzl01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GKS04_03610 (ligA) DNA replication proteins [BR:mzl03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GKS04_03610 (ligA) DNA repair and recombination proteins [BR:mzl03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GKS04_03610 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      GKS04_03610 (ligA)    MMR (mismatch excision repair)     DNA ligase      GKS04_03610 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GKS04_03610 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD HHH PTCB-BRCT BRCT_2 RNA_ligase Motif Other DBs NCBI-ProteinID:  QMU56248 UniProt:  A0A7D7VBY9 LinkDB All DBs Position 734173..736212 Genome browser AA seq 679 aa AA seqDB search MTDSAKNLVRKEYSELKKLIKKHNRLYYEKDSPEITDSEYDKLMSRFREIEKENPEFVSA DSPSRKIGGKPSSHFAPVTHLKKMMSIDNISAGETDDRPQKAHAFDARVAKATGASPAYV VQMKFDGVSASLVYENSKLARAATRGDGSVGEDITENIKTIKSVPNALCGKVRAPEIIEI RGEVIILLDDFEKLNSEMTNSEGEPFANPRNAAAGSLRQIDSRITALRPLRFFAWGVGHM SGGNPMPDEMAVSRALEGWGFKMEGGPRLCGGVEEAVKFCGEAEEKRESLKYDADGVVIK VNDMNLRQTLGETAKHPRWCVAYKFKPRHSETILKDITVQVGRTGILTPVAELEPVNIGG VTVRRASLHNANFIEERDIRVGDTVVVKRAGDVIPEVVKVVGKDRSGRPPGFKWSKVCPV CPSCGGEVSKMGDEANFICANPSCPEQLKQMIAHMASRGIFDIKGLGRETVSALVEDGVV KDIADIFSLTKERIAGMEGFAEKSSSELEREINESKEVNFGVFIAALGIRHVGKQTSELF AVEFESVDDFFSASEDILSSIKGVGPETAKTVADFTGCAKGVELKDKMLRFGVKLNYPSG RNSGAKEGISGKTFVITGRFSKPRAEIEKAIRGAGGVVSSSVSSKTDCLVRGADSGSKLN KAERLGVRIVDEKTLQKML NT seq 2040 nt NT seq  +upstreamnt  +downstreamnt atgaccgactctgctaaaaatctggttcgcaaagagtattccgaactgaaaaaactcata aaaaagcacaaccgtctctactatgagaaagacagccctgaaataaccgactccgaatat gacaaactcatgtcgcgttttcgtgagattgagaaggaaaaccctgaatttgtttctgct gactccccgtcccggaaaatcggcggcaaaccctcctcgcattttgcgcccgtaactcat ctgaaaaaaatgatgagcatagacaacatctcagccggagaaaccgatgaccgtccgcag aaggcgcacgcatttgacgcgcgggtcgccaaagcgaccggagccagccccgcttacgtc gtgcaaatgaaatttgatggtgtttcggcttcccttgtgtatgagaacagcaaactcgcc cgcgccgccacgcgcggagacggttcggttggcgaggacattacggaaaacatcaaaacc atcaaatccgtgccgaacgctctttgcggcaaagtccgcgcgcccgaaattattgagata cgcggcgaggtaataatactccttgacgattttgaaaaactgaacagcgaaatgacaaac tccgaaggcgagccttttgcgaatccgcgaaacgcggcggcgggctccttgcggcagatt gactctcgaattaccgctttgcgcccgttgagattttttgcgtggggtgtcggacacatg tctggcggtaatcctatgcctgatgaaatggcggtttcccgtgcgcttgagggctggggc tttaagatggaaggcggtccccgcttgtgcggaggtgttgaagaggcggtcaagttttgc ggtgaggcggaggaaaaaagagaatcattaaaatacgatgcggacggagttgttatcaag gtgaatgatatgaacttgcggcaaaccctcggcgaaaccgcgaaacatccgcgctggtgt gtcgcttacaaattcaaaccccgtcatagcgagacaattctgaaagacataacagttcag gttggcagaaccggaattttaacccccgtcgctgaacttgagcccgttaacatcggtggt gttacggtcagaagagcgtctttgcacaacgcgaattttatagaggagcgagacattcgg gttggtgacacggtcgttgtgaaacgcgcgggagatgtcattcccgaagttgtaaaagtc gtcggaaaagaccgctctggcagaccgcccggattcaagtggagcaaggtttgtcccgtc tgtccttcctgtggcggcgaagtctcaaaaatgggagatgaagcaaatttcatttgcgcc aacccttcctgtccggagcagttgaagcagatgatagcgcacatggcgtctcgcggaatt tttgacatcaaagggcttgggcgcgagacggtttcagctcttgttgaagacggagttgta aaggatatcgcggatattttttctctcacaaaagagaggattgccggtatggaaggtttt gccgaaaaatcatcctccgaacttgaaagggagattaatgaaagcaaagaggttaatttc ggcgtttttatagcggcgcttggaatacgtcatgtggggaaacagacctcagagttgttt gcggtggagtttgagtctgttgacgattttttcagcgcaagcgaggacattctatcttca ataaaaggggtcggtccggaaacggcgaaaacagtggcggattttacaggttgcgcaaag ggcgttgagcttaaagataaaatgttgaggttcggagtgaaattaaactacccgtccggg cggaactccggcgccaaagagggaatttccgggaaaacctttgtaattacgggaaggttc agcaaaccccgagctgaaattgaaaaagcgatacgcggcgcgggcggagttgtttcttca tcggtatcttcaaaaactgactgtcttgttcggggcgcggactcaggctccaaactaaac aaggcggagcggttgggcgtgcgtattgtagatgaaaaaactcttcagaaaatgctgtaa

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